miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00967;mir-281;AACT01010893.1/2430-2512 51511:Ciona savignyi
          Length = 83

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 58 cgctgtcatggagttgctctct 79
          ||||||||||||||||||||||
Sbjct: 46 cgctgtcatggagttgctctct 67




>RF00967;mir-281;AABS01000211.1/21157-21238 7719:Ciona
          intestinalis
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 ctgtcatggagttgctctctta 81
          ||||||||||||||||||||||
Sbjct: 47 ctgtcatggagttgctctctta 68




>RF00249;mir-46;ABLG01000135.1/98827-98917 6305:Meloidogyne hapla
          Length = 91

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 59 gctgtcatggagttgctctctt 80
          ||||||||||||||||||||||
Sbjct: 63 gctgtcatggagttgctctctt 84