miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00844;mir-67;ABJB010869367.1/2416-2352 6945:Ixodes scapularis
(black-legged tick)
Length = 65
Score = 129 bits (65), Expect = 7e-30
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 19 tcctcactcagtttggctgtggtgtaacgggcgctcgacccatcacaacctccttgagtg 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctcactcagtttggctgtggtgtaacgggcgctcgacccatcacaacctccttgagtg 60
Query: 79 agtga 83
|||||
Sbjct: 61 agtga 65
>RF00844;mir-67;AACY021758693.1/790-733 408172:marine metagenome
Length = 58
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 tcacaacctccttgagtgagtga 83
|||||||||||||||||||||||
Sbjct: 36 tcacaacctccttgagtgagtga 58
>RF00844;mir-67;AAPU01010253.1/29382-29448 7230:Drosophila
mojavensis
Length = 67
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 ccatcacaacctccttgagtgag 80
|||||||||||||||||||||||
Sbjct: 42 ccatcacaacctccttgagtgag 64
>RF00844;mir-67;AAJJ01001473.1/10807-10747 7070:Tribolium
castaneum (red flour beetle)
Length = 61
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 ccatcacaacctccttgagtgag 80
|||||||||||||||||||||||
Sbjct: 36 ccatcacaacctccttgagtgag 58
>RF00844;mir-67;ABKP02019157.1/49006-49065 377271:Anopheles
gambiae M
Length = 60
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 catcacaacctccttgagtgag 80
||||||||||||||||||||||
Sbjct: 36 catcacaacctccttgagtgag 57
