miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;AAJJ01001355.1/29616-29540 7070:Tribolium castaneum
(red flour beetle)
Length = 77
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 58 ttctaatactgtcaggtaaagatgtcctccg 88
|||||||||||||||||||||||||||||||
Sbjct: 45 ttctaatactgtcaggtaaagatgtcctccg 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 catcttaccgggcagcattagatt 33
||||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagatt 33
>RF00241;mir-8;ABJB010621523.1/197-271 6945:Ixodes scapularis
(black-legged tick)
Length = 75
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 54 tgatttctaatactgtcaggtaaagatgtcc 84
|||||||||||||||||||||||||||||||
Sbjct: 39 tgatttctaatactgtcaggtaaagatgtcc 69
>RF00241;mir-8;AAAB01008986.1/3020387-3020310 180454:Anopheles
gambiae str. PEST
Length = 78
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 56 atttctaatactgtcaggtaaagatgtcctccg 88
|||||||||||||||||||||||||||| ||||
Sbjct: 45 atttctaatactgtcaggtaaagatgtcgtccg 77
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 catcttaccgggcagcattagat 32
|||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagat 32
>RF00241;mir-8;BAAB01175925.1/123-47 7091:Bombyx mori (domestic
silkworm)
Length = 77
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 57 tttctaatactgtcaggtaaagatgtcctccg 88
||||||||||||||||||||||||||| ||||
Sbjct: 45 tttctaatactgtcaggtaaagatgtcgtccg 76
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 catcttaccgggcagcattaga 31
||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattaga 31
>RF00241;mir-8;AAQB01006282.1/186530-186609 7260:Drosophila
willistoni
Length = 80
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tctaatactgtcaggtaaagatgtcctccgt 89
||||||||||||||||||||||||| |||||
Sbjct: 50 tctaatactgtcaggtaaagatgtcgtccgt 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 catcttaccgggcagcattagatt 33
||||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagatt 33
>RF00241;mir-8;AAPU01010182.1/5430-5508 7230:Drosophila mojavensis
Length = 79
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tctaatactgtcaggtaaagatgtcctccgt 89
||||||||||||||||||||||||| |||||
Sbjct: 49 tctaatactgtcaggtaaagatgtcgtccgt 79
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 catcttaccgggcagcattagatt 33
||||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagatt 33
>RF00241;mir-8;AAZO01008551.1/16828-16905 121224:Pediculus humanus
corporis (human body louse)
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 gtttccatcttaccgggcagcattagattg 34
|||| |||||||||||||||||||||||||
Sbjct: 5 gtttacatcttaccgggcagcattagattg 34
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 58 ttctaatactgtcaggtaaagatgtcctc 86
||||||||||||||||||| |||||||||
Sbjct: 46 ttctaatactgtcaggtaatgatgtcctc 74
>RF00241;mir-8;AADG05004155.1/1299-1373 7460:Apis mellifera (honey
bee)
Length = 75
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 ttctaatactgtcaggtaaagatgtc 83
||||||||||||||||||||||||||
Sbjct: 44 ttctaatactgtcaggtaaagatgtc 69
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 catcttaccgggcagcattagattg 34
|||||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagattg 34
>RF00241;mir-8;ABLF01004189.1/21301-21379 7029:Acyrthosiphon pisum
(pea aphid)
Length = 79
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 tctaatactgtcaggtaaagatgtcctc 86
|||||||||||||||||| |||||||||
Sbjct: 48 tctaatactgtcaggtaatgatgtcctc 75
