miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01926;mir-981;AAPT01018880.1/172410-172517 7222:Drosophila
          grimshawi
          Length = 108

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gttcgttgtcgacgaaacctgcata 84
          |||||||||||||||||||||||||
Sbjct: 64 gttcgttgtcgacgaaacctgcata 88




>RF01926;mir-981;AANI01015799.1/578-686 7244:Drosophila virilis
          Length = 109

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gttcgttgtcgacgaaacctgcata 84
          |||||||||||||||||||||||||
Sbjct: 65 gttcgttgtcgacgaaacctgcata 89




>RF01926;mir-981;AAPP01015855.1/4220-4330 7217:Drosophila
          ananassae
          Length = 111

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 67 gttcgttgtcgacgaaacctgcat 90




>RF01926;mir-981;AAQB01008759.1/20932-21051 7260:Drosophila
          willistoni
          Length = 120

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 75 gttcgttgtcgacgaaacctgcat 98




>RF01926;mir-981;AABU01002762.1/8939148-8939258 7227:Drosophila
          melanogaster (fruit fly)
          Length = 111

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 67 gttcgttgtcgacgaaacctgcat 90




>RF01926;mir-981;AAFS01000238.1/65682-65572 46245:Drosophila
          pseudoobscura pseudoobscura
          Length = 111

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 67 gttcgttgtcgacgaaacctgcat 90




>RF01926;mir-981;AAPU01008298.1/3476-3586 7230:Drosophila
          mojavensis
          Length = 111

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 67 gttcgttgtcgacgaaacctgcat 90




>RF01926;mir-981;AAWU01022546.1/521-633 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 113

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 gttcgttgtcgacgaaacctgca 82
          |||||||||||||||||||||||
Sbjct: 69 gttcgttgtcgacgaaacctgca 91




>RF01926;mir-981;AAGE02007302.1/184866-184756 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 111

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 gttcgttgtcgacgaaacctgca 82
          |||||||||||||||||||||||
Sbjct: 67 gttcgttgtcgacgaaacctgca 89




>RF01926;mir-981;ABKP02011026.1/463-579 377271:Anopheles gambiae M
          Length = 117

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 ttcgttgtcgacgaaacctgca 82
          ||||||||||||||||||||||
Sbjct: 74 ttcgttgtcgacgaaacctgca 95