miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;ABLF01004189.1/21301-21379 7029:Acyrthosiphon pisum
(pea aphid)
Length = 79
Score = 125 bits (63), Expect = 6e-29
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 cgtcttacttgggcaggattagagtgacaattgatatgtctaatactgtcaggtaatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cgtcttacttgggcaggattagagtgacaattgatatgtctaatactgtcaggtaatgat 69
Query: 61 gtc 63
|||
Sbjct: 70 gtc 72
>RF00241;mir-8;AAZO01008551.1/16828-16905 121224:Pediculus humanus
corporis (human body louse)
Length = 78
Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||||||||||
Sbjct: 47 tctaatactgtcaggtaatgatgtc 71
>RF00241;mir-8;AAAB01008986.1/3020387-3020310 180454:Anopheles
gambiae str. PEST
Length = 78
Score = 46.1 bits (23), Expect = 5e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 33 gatatgtctaatactgtcaggtaatgatgtc 63
||||| |||||||||||||||||| ||||||
Sbjct: 42 gatatttctaatactgtcaggtaaagatgtc 72
>RF00241;mir-8;AAQB01006282.1/186530-186609 7260:Drosophila
willistoni
Length = 80
Score = 46.1 bits (23), Expect = 5e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 33 gatatgtctaatactgtcaggtaatgatgtc 63
||||| |||||||||||||||||| ||||||
Sbjct: 44 gatatctctaatactgtcaggtaaagatgtc 74
>RF00241;mir-8;BAAB01175925.1/123-47 7091:Bombyx mori (domestic
silkworm)
Length = 77
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 47 tctaatactgtcaggtaaagatgtc 71
>RF00241;mir-8;AADG05004155.1/1299-1373 7460:Apis mellifera (honey
bee)
Length = 75
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 45 tctaatactgtcaggtaaagatgtc 69
>RF00241;mir-8;AAPU01010182.1/5430-5508 7230:Drosophila mojavensis
Length = 79
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 49 tctaatactgtcaggtaaagatgtc 73
>RF00241;mir-8;AAJJ01001355.1/29616-29540 7070:Tribolium castaneum
(red flour beetle)
Length = 77
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 46 tctaatactgtcaggtaaagatgtc 70
>RF00241;mir-8;ABJB010621523.1/197-271 6945:Ixodes scapularis
(black-legged tick)
Length = 75
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 44 tctaatactgtcaggtaaagatgtc 68
