miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00074;mir-29;ABLF01034895.1/6534-6605 7029:Acyrthosiphon pisum
(pea aphid)
Length = 72
Score = 127 bits (64), Expect = 2e-29
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 1 tggtttcgtattggtgcatagaagtattaattttgtaacttgtctagcaccatttgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tggtttcgtattggtgcatagaagtattaattttgtaacttgtctagcaccatttgaaac 65
Query: 61 cagt 64
||||
Sbjct: 66 cagt 69
>RF00074;mir-29;AADN02039691.1/13652-13582 9031:Gallus gallus
(chicken)
Length = 71
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 ttgtctagcaccatttgaaaccagt 64
|||||||||||||||||||| ||||
Sbjct: 42 ttgtctagcaccatttgaaatcagt 66
>RF00074;mir-29;BAAE01022609.1/1375-1305 8090:Oryzias latipes
(Japanese medaka)
Length = 71
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 ttgtctagcaccatttgaaaccagt 64
|||||||||||||||||||| ||||
Sbjct: 42 ttgtctagcaccatttgaaatcagt 66
