miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00104;mir-10;ABLF01019923.1/4047-3973 7029:Acyrthosiphon pisum
(pea aphid)
Length = 75
Score = 149 bits (75), Expect = 8e-36
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 14 ttgctacgacccgtagatccgaacttgtgtcgcaaagtttagtatcacaagttcgtttct 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctacgacccgtagatccgaacttgtgtcgcaaagtttagtatcacaagttcgtttct 60
Query: 74 agaggatacagccac 88
|||||||||||||||
Sbjct: 61 agaggatacagccac 75
>RF00104;mir-10;ABAV01011074.1/24648-24715 45351:Nematostella
vectensis (starlet sea anemone)
Length = 68
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 cgacccgtagatccgaacttgtg 42
|||||||||||||||||||||||
Sbjct: 7 cgacccgtagatccgaacttgtg 29
>RF00104;mir-10;BAAF04027544.1/3636-3567 8090:Oryzias latipes
(Japanese medaka)
Length = 70
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgtc 44
|||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgtc 31
>RF00104;mir-10;ABJB010963031.1/703-629 6945:Ixodes scapularis
(black-legged tick)
Length = 75
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgtc 44
|||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgtc 31
>RF00104;mir-10;ABIR01000029.1/41879-41953 6334:Trichinella
spiralis
Length = 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgt 43
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgt 30
>RF00104;mir-10;AAQA01000457.1/25556-25481 6279:Brugia malayi
Length = 76
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgt 43
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgt 30
>RF00104;mir-10;CAAB01004143.1/16784-16858 31033:Takifugu rubripes
Length = 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgt 43
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgt 30
>RF00104;mir-10;ABEP02005607.1/34557-34626 7739:Branchiostoma
floridae (Florida lancelet)
Length = 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgt 43
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgt 30
>RF00104;mir-10;AAZO01005184.1/23040-23119 121224:Pediculus
humanus corporis (human body louse)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 acccgtagatccgaacttgtgt 43
||||||||||||||||||||||
Sbjct: 9 acccgtagatccgaacttgtgt 30
