miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00657;mir-184;ABLF01040198.1/2219-2138 7029:Acyrthosiphon pisum
(pea aphid)
Length = 82
Score = 119 bits (60), Expect = 4e-27
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 ctttatcattctctggtcttgtgtgaattttatactactggacggagaactgataaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ctttatcattctctggtcttgtgtgaattttatactactggacggagaactgataaagga 72
>RF00657;mir-184;ABLF01000583.1/9706-9626 7029:Acyrthosiphon pisum
(pea aphid)
Length = 81
Score = 46.1 bits (23), Expect = 4e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 18 cttgtgtgaattttatactactggacggagaactgataa 56
|||||||| | |||| || ||||||||||||||||||||
Sbjct: 29 cttgtgtgcaatttaaacaactggacggagaactgataa 67
>RF00657;mir-184;BAAB01083504.1/1731-1651 7091:Bombyx mori
(domestic silkworm)
Length = 81
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 34 actactggacggagaactgataa 56
|||||||||||||||||||||||
Sbjct: 45 actactggacggagaactgataa 67
>RF00657;mir-184;AAPU01010071.1/6500-6418 7230:Drosophila
mojavensis
Length = 83
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tatactactggacggagaactgataa 56
||||| ||||||||||||||||||||
Sbjct: 44 tatacaactggacggagaactgataa 69
