miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00838;mir-252;ABLF01035568.1/15094-15205 7029:Acyrthosiphon
pisum (pea aphid)
Length = 112
Score = 129 bits (65), Expect = 4e-30
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 ctaagtactagtgccgcgggagtgatatccgttttttgtatctcctgcagctcaagtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 ctaagtactagtgccgcgggagtgatatccgttttttgtatctcctgcagctcaagtgct 85
Query: 61 tatca 65
|||||
Sbjct: 86 tatca 90
>RF00838;mir-252;AADG05011415.1/92-6 7460:Apis mellifera (honey
bee)
Length = 87
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 39 tatctcctgcagctcaagtgcttatca 65
|||||||||| ||||||||||||||||
Sbjct: 56 tatctcctgctgctcaagtgcttatca 82
>RF00838;mir-252;AAZX01009285.1/3883-4013 7425:Nasonia vitripennis
(jewel wasp)
Length = 131
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ctaagtactagtgccgcgggagtga 25
||||||||||||||||| |||||||
Sbjct: 28 ctaagtactagtgccgcaggagtga 52
Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 tctcctgcagctcaagtgcttatca 65
|||||||| ||||||||||||||||
Sbjct: 78 tctcctgctgctcaagtgcttatca 102
