miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00637;mir-276;ABLF01003513.1/4658-4754 7029:Acyrthosiphon pisum
(pea aphid)
Length = 97
Score = 153 bits (77), Expect = 4e-37
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 gaccactagcgaggtatagagttcctacgttcaaattattaatgttactcgtaggaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gaccactagcgaggtatagagttcctacgttcaaattattaatgttactcgtaggaactt 68
Query: 61 cataccgtgctcttgga 77
|||||||||||||||||
Sbjct: 69 cataccgtgctcttgga 85
>RF00637;mir-276;AANI01017424.1/110847-110939 7244:Drosophila
virilis
Length = 93
Score = 83.8 bits (42), Expect = 3e-16
Identities = 63/70 (90%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgttcaaattattaatgttactcgtaggaacttcataccg 67
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgttcaatttata-----tactcgtaggaacttcataccg 71
Query: 68 tgctcttgga 77
||||||||||
Sbjct: 72 tgctcttgga 81
>RF00637;mir-276;AAJJ01000143.1/58311-58223 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 60.0 bits (30), Expect = 4e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 gaccactagcgaggtatagagttcctacgt 30
||||||||||||||||||||||||||||||
Sbjct: 8 gaccactagcgaggtatagagttcctacgt 37
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||||||||||||||||||||
Sbjct: 50 gtaggaacttcataccgtgctcttgga 76
>RF00637;mir-276;AADK01021256.1/890-979 7091:Bombyx mori (domestic
silkworm)
Length = 90
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 accactagcgaggtatagagttcctacgt 30
|||||||||||||||||||||||||||||
Sbjct: 11 accactagcgaggtatagagttcctacgt 39
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgg 76
||||||||||||||||||||||||||
Sbjct: 51 gtaggaacttcataccgtgctcttgg 76
>RF00637;mir-276;AAPU01011641.1/29322-29227 7230:Drosophila
mojavensis
Length = 96
Score = 58.0 bits (29), Expect = 2e-08
Identities = 60/70 (85%), Gaps = 4/70 (5%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgttcaaattattaatgttactcgtaggaacttcataccg 67
||||||||||||||||||||||| |||||| | || |||||||||||| ||||||
Sbjct: 19 agcgaggtatagagttcctacgtgcaaattgcaa----tagtcgtaggaacttaataccg 74
Query: 68 tgctcttgga 77
||||||||||
Sbjct: 75 tgctcttgga 84
>RF00637;mir-276;ABKP02026752.1/53325-53226 377271:Anopheles
gambiae M
Length = 100
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 46 tactcgtaggaacttcataccgtgctcttgga 77
||||| ||||||||||||||||||||||||||
Sbjct: 57 tactcataggaacttcataccgtgctcttgga 88
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 ccactagcgaggtatagagttccta 27
|||| ||||||||||||||||||||
Sbjct: 11 ccaccagcgaggtatagagttccta 35
>RF00637;mir-276;ABKQ02021479.1/6963-6864 377270:Anopheles gambiae
S
Length = 100
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 46 tactcgtaggaacttcataccgtgctcttgga 77
||||| ||||||||||||||||||||||||||
Sbjct: 57 tactcataggaacttcataccgtgctcttgga 88
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 ccactagcgaggtatagagttccta 27
|||| ||||||||||||||||||||
Sbjct: 11 ccaccagcgaggtatagagttccta 35
>RF00637;mir-276;AAZO01003220.1/6657-6747 121224:Pediculus humanus
corporis (human body louse)
Length = 91
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||||||||||||||||||||
Sbjct: 52 gtaggaacttcataccgtgctcttgga 78
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgt 30
|||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgt 39
>RF00637;mir-276;AAZX01001999.1/5300-5391 7425:Nasonia vitripennis
(jewel wasp)
Length = 92
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||||||||||||||||||||
Sbjct: 53 gtaggaacttcataccgtgctcttgga 79
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgt 30
|||||||||||||||||||||||
Sbjct: 18 agcgaggtatagagttcctacgt 40
>RF00637;mir-276;AADG05002822.1/76702-76793 7460:Apis mellifera
(honey bee)
Length = 92
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||||||||||||||||||||
Sbjct: 53 gtaggaacttcataccgtgctcttgga 79
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgt 30
|||||||||||||||||||||||
Sbjct: 18 agcgaggtatagagttcctacgt 40
>RF00637;mir-276;ABKQ02021477.1/23012-22918 377270:Anopheles
gambiae S
Length = 95
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgga 77
|||||||||||||||||||||||||||
Sbjct: 57 gtaggaacttcataccgtgctcttgga 83
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacg 29
||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacg 38
>RF00637;mir-276;AAWU01010561.1/6178-6274 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 taggaacttcataccgtgctcttgga 77
||||||||||||||||||||||||||
Sbjct: 60 taggaacttcataccgtgctcttgga 85
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctagcgaggtatagagttccta 27
||||||||||||||||||||||
Sbjct: 14 ctagcgaggtatagagttccta 35
>RF00637;mir-276;AAGE02007617.1/38970-39063 7159:Aedes aegypti
(yellow fever mosquito)
Length = 94
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 gtaggaacttcataccgtgctcttgg 76
||||||||||||||||||||||||||
Sbjct: 56 gtaggaacttcataccgtgctcttgg 81
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgtt 31
||||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgtt 40
>RF00637;mir-276;AAGE02000417.1/11129-11035 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 taggaacttcataccgtgctcttgga 77
||||||||||||||||||||||||||
Sbjct: 58 taggaacttcataccgtgctcttgga 83
>RF00637;mir-276;AADE01001409.1/12453-12359 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 49 tcgtaggaacttcataccgtgctcttgga 77
|||||||||||| ||||||||||||||||
Sbjct: 55 tcgtaggaacttaataccgtgctcttgga 83
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgt 30
|||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgt 41
>RF00637;mir-276;AE014296.4/10312890-10312983 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 agcgaggtatagagttcctacgttc 32
|||||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgttc 43
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 49 tcgtaggaacttcataccgtgctcttgga 77
|||||||||||| ||||||||||||||||
Sbjct: 54 tcgtaggaacttaataccgtgctcttgga 82
