miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00747;mir-283;AAGE02004323.1/32429-32333 7159:Aedes aegypti
(yellow fever mosquito)
Length = 97
Score = 190 bits (96), Expect = 2e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 gttcgactgaaaggtcaatatcagctggtaattctgggcttaccccaccgttatacgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gttcgactgaaaggtcaatatcagctggtaattctgggcttaccccaccgttatacgctt 61
Query: 61 cccggaattccaactgatatccactttttagtcgag 96
||||||||||||||||||||||||||||||||||||
Sbjct: 62 cccggaattccaactgatatccactttttagtcgag 97
>RF00747;mir-283;AAWU01005348.1/2399-2495 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 111 bits (56), Expect = 2e-24
Identities = 88/96 (91%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 1 gttcgactgaaaggtcaatatcagctggtaattctgggcttacccca-ccgttatacgct 59
||||| ||||||||||||||||||||||||||||||||||| || | ||||| | ||||
Sbjct: 2 gttcggctgaaaggtcaatatcagctggtaattctgggctttccaaacccgttgt-cgct 60
Query: 60 tcccggaattccaactgatatccactttttagtcga 95
|||||| |||||||||||||||||||||||||||||
Sbjct: 61 tcccgggattccaactgatatccactttttagtcga 96
>RF00747;mir-283;ABKQ02004749.1/31643-31736 377270:Anopheles
gambiae S
Length = 94
Score = 56.0 bits (28), Expect = 9e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 gttcgactgaaaggtcaatatcagctggtaattctgggct 40
||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 2 gttcgaccgaaaggtaaatatcagctggtaattctaggct 41
>RF00747;mir-283;BAAB01105947.1/481-397 7091:Bombyx mori (domestic
silkworm)
Length = 85
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 aatatcagctggtaattctgggctt 41
|||||||||||||||||||||||||
Sbjct: 18 aatatcagctggtaattctgggctt 42
>RF00747;mir-283;AAQB01006319.1/8842-8742 7260:Drosophila
willistoni
Length = 101
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 aaaggtcaatatcagctggtaattctggg 38
|||||| ||||||||||||||||||||||
Sbjct: 13 aaaggtaaatatcagctggtaattctggg 41
>RF00747;mir-283;AAPU01008564.1/40966-41063 7230:Drosophila
mojavensis
Length = 98
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 aaaggtcaatatcagctggtaattctggg 38
|||||| ||||||||||||||||||||||
Sbjct: 13 aaaggtaaatatcagctggtaattctggg 41
>RF00747;mir-283;AAZX01000006.1/24204-24295 7425:Nasonia
vitripennis (jewel wasp)
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 aatatcagctggtaattctggg 38
||||||||||||||||||||||
Sbjct: 20 aatatcagctggtaattctggg 41
>RF00747;mir-283;AADG05008150.1/23792-23703 7460:Apis mellifera
(honey bee)
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 aatatcagctggtaattctggg 38
||||||||||||||||||||||
Sbjct: 20 aatatcagctggtaattctggg 41
>RF00747;mir-283;AAJJ01001605.1/25781-25866 7070:Tribolium
castaneum (red flour beetle)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 aatatcagctggtaattctggg 38
||||||||||||||||||||||
Sbjct: 18 aatatcagctggtaattctggg 39
