miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00789;mir-286;AAGE02008291.1/17656-17755 7159:Aedes aegypti
(yellow fever mosquito)
Length = 100
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 aagtcctggggcgattgtcggcttagtcgctgtatcatttcaactgctgtgcagttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcctggggcgattgtcggcttagtcgctgtatcatttcaactgctgtgcagttcttc 60
Query: 61 gctagtgactagaccgaacactcgtatcccaggcctt 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctagtgactagaccgaacactcgtatcccaggcctt 97
>RF00789;mir-286;AAWU01006018.1/401-308 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 94
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 2 agtcctggggcgattgtcggcttagtcgctgt 33
||||||||||||||||||||||| ||||||||
Sbjct: 1 agtcctggggcgattgtcggcttggtcgctgt 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgtatcc 89
||||||||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcgtatcc 84
>RF00789;mir-286;ABKP02021621.1/18938-19014 377271:Anopheles
gambiae M
Length = 77
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgtatcc 89
||||||||||||||||||||||||||
Sbjct: 46 agtgactagaccgaacactcgtatcc 71
>RF00789;mir-286;AAGE02018252.1/93413-93512 7159:Aedes aegypti
(yellow fever mosquito)
Length = 100
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 ctagtgactagaccgaacactcg 84
|||||||||||||||||||||||
Sbjct: 59 ctagtgactagaccgaacactcg 81
>RF00789;mir-286;ABKQ02013446.1/12551-12632 377270:Anopheles
gambiae S
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 tagtgactagaccgaacactcg 84
||||||||||||||||||||||
Sbjct: 50 tagtgactagaccgaacactcg 71
>RF00789;mir-286;AAQB01006291.1/71587-71475 7260:Drosophila
willistoni
Length = 113
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 76 agtgactagaccgaacactcgt 97
>RF00789;mir-286;AAFS01000371.1/25325-25421 46245:Drosophila
pseudoobscura pseudoobscura
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 60 agtgactagaccgaacactcgt 81
>RF00789;mir-286;AAPP01018770.1/56774-56877 7217:Drosophila
ananassae
Length = 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 67 agtgactagaccgaacactcgt 88
>RF00789;mir-286;AAPQ01007044.1/1205305-1205207 7220:Drosophila
erecta
Length = 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 62 agtgactagaccgaacactcgt 83
>RF00789;mir-286;AAPT01006453.1/2821-2925 7222:Drosophila
grimshawi
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 68 agtgactagaccgaacactcgt 89
>RF00789;mir-286;AAPU01010225.1/183664-183561 7230:Drosophila
mojavensis
Length = 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 67 agtgactagaccgaacactcgt 88
>RF00789;mir-286;AANI01014795.1/39192-39293 7244:Drosophila
virilis
Length = 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 agtgactagaccgaacactcgt 85
||||||||||||||||||||||
Sbjct: 65 agtgactagaccgaacactcgt 86
