miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00947;mir-929;AAGE02012461.1/76734-76639 7159:Aedes aegypti
(yellow fever mosquito)
Length = 96
Score = 174 bits (88), Expect = 1e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 tgcctacgactggtccaaattgactctagtagggagtccttgtgtacgagtgactcccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctacgactggtccaaattgactctagtagggagtccttgtgtacgagtgactcccta 60
Query: 61 acggagtcagattgaacccggtaggatg 88
||||||||||||||||||||||||||||
Sbjct: 61 acggagtcagattgaacccggtaggatg 88
>RF00947;mir-929;AAWU01005610.1/5708-5613 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 96
Score = 147 bits (74), Expect = 3e-35
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 1 tgcctacgactggtccaaattgactctagtagggagtccttgtgtacgagtgactcccta 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctacgactggcccaaattgactctagtagggagtccttgtgtacgagtgactcccta 60
Query: 61 acggagtcagattgaacccggtagga 86
||||||||||||||| |||| |||||
Sbjct: 61 acggagtcagattgagcccgctagga 86
>RF00947;mir-929;ABKP02012769.1/7854-7759 377271:Anopheles gambiae
M
Length = 96
Score = 95.6 bits (48), Expect = 9e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattgaa 76
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattgat 76
Query: 77 cccggtag 84
|||||||
Sbjct: 77 tccggtag 84
>RF00947;mir-929;AAAB01008089.1/34548-34645 180454:Anopheles
gambiae str. PEST
Length = 98
Score = 95.6 bits (48), Expect = 9e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattgaa 76
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattgat 76
Query: 77 cccggtag 84
|||||||
Sbjct: 77 tccggtag 84
>RF00947;mir-929;AANI01014363.1/204913-205006 7244:Drosophila
virilis
Length = 94
Score = 75.8 bits (38), Expect = 8e-14
Identities = 56/61 (91%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcctttc--acgagcgactccctaacggagtcagattga 73
Query: 76 a 76
|
Sbjct: 74 a 74
>RF00947;mir-929;AAQB01008629.1/27335-27241 7260:Drosophila
willistoni
Length = 95
Score = 73.8 bits (37), Expect = 3e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
|||||||||||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcctt-tatataagcgactccctaacggagtcagattga 74
Query: 76 a 76
|
Sbjct: 75 a 75
>RF00947;mir-929;AAFS01002785.1/3282-3188 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 73.8 bits (37), Expect = 3e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
|||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 74
Query: 76 a 76
|
Sbjct: 75 a 75
>RF00947;mir-929;AABU01002551.1/121293-121386 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 65.9 bits (33), Expect = 8e-11
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcct--ttaatgagcgactccctaacggagtcagattga 73
>RF00947;mir-929;AAPU01011179.1/143817-143911 7230:Drosophila
mojavensis
Length = 95
Score = 58.0 bits (29), Expect = 2e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
|||||||||||||||||||||||||| | | | ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcctt-ttttttaacgactccctaacggagtcagattga 74
Query: 76 a 76
|
Sbjct: 75 a 75
>RF00947;mir-929;ABLF01011736.1/10860-10764 7029:Acyrthosiphon
pisum (pea aphid)
Length = 97
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tggtccaaattgactctagtagggagtcctt 41
|||| ||||||||||||||||||||||||||
Sbjct: 11 tggttcaaattgactctagtagggagtcctt 41
>RF00947;mir-929;AAZO01002930.1/51339-51440 121224:Pediculus
humanus corporis (human body louse)
Length = 102
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gactccctaacggagtcagattga 75
||||||||||||||||||||||||
Sbjct: 58 gactccctaacggagtcagattga 81
>RF00947;mir-929;AAZX01003135.1/832-932 7425:Nasonia vitripennis
(jewel wasp)
Length = 101
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
>RF00947;mir-929;AADG05005366.1/7427-7326 7460:Apis mellifera
(honey bee)
Length = 102
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
>RF00947;mir-929;AAJJ01001068.1/14929-15025 7070:Tribolium
castaneum (red flour beetle)
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcc 39
>RF00947;mir-929;BAAB01013302.1/660-751 7091:Bombyx mori (domestic
silkworm)
Length = 92
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtcc 39
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
