miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01916;mir-988;AAGE02017684.1/78072-77982 7159:Aedes aegypti
(yellow fever mosquito)
Length = 91
Score = 149 bits (75), Expect = 6e-36
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gctgcgggtgtgtgctttgtgacaatgagattcggttcgatatcatccccttgttgcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gctgcgggtgtgtgctttgtgacaatgagattcggttcgatatcatccccttgttgcaaa 71
Query: 61 cctcacgcttgcggt 75
|||||||||||||||
Sbjct: 72 cctcacgcttgcggt 86
>RF01916;mir-988;AAWU01031362.1/14271-14365 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 95
Score = 103 bits (52), Expect = 3e-22
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gctgcgggtgtgtgctttgtgacaatgagattcgg-ttcgatatcatccccttgttgcaa 59
||||||||||||||||||||||||| ||||||| | || || ||||||||||||||||||
Sbjct: 13 gctgcgggtgtgtgctttgtgacaacgagattcagctttgaaatcatccccttgttgcaa 72
Query: 60 acctcacgcttgcggt 75
||||||||||||||||
Sbjct: 73 acctcacgcttgcggt 88
>RF01916;mir-988;AAAB01008807.1/10005268-10005171 180454:Anopheles
gambiae str. PEST
Length = 98
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 43 tcatccccttgttgcaaacctcacgcttgcggt 75
||||||||||||||||||||||||||| |||||
Sbjct: 58 tcatccccttgttgcaaacctcacgctggcggt 90
>RF01916;mir-988;AAPP01018719.1/1940-2034 7217:Drosophila
ananassae
Length = 95
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 atcatccccttgttgcaaacctcacgc 68
|||||||||||||||||||||||||||
Sbjct: 53 atcatccccttgttgcaaacctcacgc 79
>RF01916;mir-988;AADE01001322.1/5472-5565 46245:Drosophila
pseudoobscura pseudoobscura
Length = 94
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 atcatccccttgttgcaaacctcacgc 68
|||||||||||||||||||||||||||
Sbjct: 53 atcatccccttgttgcaaacctcacgc 79
>RF01916;mir-988;AASS01029226.1/300-392 7240:Drosophila simulans
Length = 93
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 atcatccccttgttgcaaacctcacgc 68
|||||||||||||||||||||||||||
Sbjct: 53 atcatccccttgttgcaaacctcacgc 79
>RF01916;mir-988;AANI01014949.1/118376-118469 7244:Drosophila
virilis
Length = 94
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 catccccttgttgcaaacctcacgc 68
|||||||||||||||||||||||||
Sbjct: 56 catccccttgttgcaaacctcacgc 80
>RF01916;mir-988;AAQB01009924.1/1034111-1034206 7260:Drosophila
willistoni
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 45 atccccttgttgcaaacctcacgc 68
||||||||||||||||||||||||
Sbjct: 56 atccccttgttgcaaacctcacgc 79
