miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;AAAB01008986.1/3020387-3020310 180454:Anopheles
gambiae str. PEST
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 5 gtctgttcacatcttaccgggcagcattagatatgttatcggatatttctaatactgtca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctgttcacatcttaccgggcagcattagatatgttatcggatatttctaatactgtca 60
Query: 65 ggtaaagatgtcgtccga 82
||||||||||||||||||
Sbjct: 61 ggtaaagatgtcgtccga 78
>RF00241;mir-8;AAQB01006282.1/186530-186609 7260:Drosophila
willistoni
Length = 80
Score = 79.8 bits (40), Expect = 5e-15
Identities = 72/79 (91%), Gaps = 4/79 (5%)
Strand = Plus / Plus
Query: 6 tctgttcacatcttaccgggcagcattagatat-gt--tatcggatatttctaatactgt 62
||||||||||||||||||||||||||||||| | || ||| | |||| |||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagattttgtactatag-atatctctaatactgt 60
Query: 63 caggtaaagatgtcgtccg 81
|||||||||||||||||||
Sbjct: 61 caggtaaagatgtcgtccg 79
>RF00241;mir-8;AAPU01010182.1/5430-5508 7230:Drosophila mojavensis
Length = 79
Score = 69.9 bits (35), Expect = 5e-12
Identities = 69/78 (88%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 6 tctgttcacatcttaccgggcagcattagat--atgttatcggatatttctaatactgtc 63
||||||||||||||||||||||||||||||| |||| | ||| ||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagattcctgtt-ttaaataactctaatactgtc 60
Query: 64 aggtaaagatgtcgtccg 81
||||||||||||||||||
Sbjct: 61 aggtaaagatgtcgtccg 78
>RF00241;mir-8;BAAB01175925.1/123-47 7091:Bombyx mori (domestic
silkworm)
Length = 77
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 50 tttctaatactgtcaggtaaagatgtcgtccg 81
||||||||||||||||||||||||||||||||
Sbjct: 45 tttctaatactgtcaggtaaagatgtcgtccg 76
>RF00241;mir-8;AADG05004155.1/1299-1373 7460:Apis mellifera (honey
bee)
Length = 75
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 6 tctgttcacatcttaccgggcagcattagat 36
|||||||||||||||||||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagat 32
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 51 ttctaatactgtcaggtaaagatgtcgtc 79
|||||||||||||||||||||||||||||
Sbjct: 44 ttctaatactgtcaggtaaagatgtcgtc 72
>RF00241;mir-8;AAJJ01001355.1/29616-29540 7070:Tribolium castaneum
(red flour beetle)
Length = 77
Score = 60.0 bits (30), Expect = 5e-09
Identities = 66/76 (86%), Gaps = 4/76 (5%)
Strand = Plus / Plus
Query: 7 ctgttcacatcttaccgggcagcattagat-atgttatcggatatttctaatactgtcag 65
||||| |||||||||||||||||||||||| | || | ||| |||||||||||||||
Sbjct: 3 ctgttaacatcttaccgggcagcattagattacatttt---atacttctaatactgtcag 59
Query: 66 gtaaagatgtcgtccg 81
||||||||||| ||||
Sbjct: 60 gtaaagatgtcctccg 75
>RF00241;mir-8;ABJB010621523.1/197-271 6945:Ixodes scapularis
(black-legged tick)
Length = 75
Score = 56.0 bits (28), Expect = 7e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 49 atttctaatactgtcaggtaaagatgtc 76
||||||||||||||||||||||||||||
Sbjct: 41 atttctaatactgtcaggtaaagatgtc 68
>RF00241;mir-8;AAZO01008551.1/16828-16905 121224:Pediculus humanus
corporis (human body louse)
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 7 ctgttcacatcttaccgggcagcattagat 36
||||| ||||||||||||||||||||||||
Sbjct: 3 ctgtttacatcttaccgggcagcattagat 32
>RF00241;mir-8;ABLF01004189.1/21301-21379 7029:Acyrthosiphon pisum
(pea aphid)
Length = 79
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 46 gatatttctaatactgtcaggtaaagatgtc 76
||||| |||||||||||||||||| ||||||
Sbjct: 42 gatatgtctaatactgtcaggtaatgatgtc 72
