miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00947;mir-929;ABKP02012769.1/7854-7759 377271:Anopheles gambiae
M
Length = 96
Score = 176 bits (89), Expect = 3e-44
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 cctacgcgtgggattaaattgactctagtagggagtccttttatacgagcgactccctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cctacgcgtgggattaaattgactctagtagggagtccttttatacgagcgactccctaa 61
Query: 61 cggagtcagattgattccggtagtgcacc 89
|||||||||||||||||||||||||||||
Sbjct: 62 cggagtcagattgattccggtagtgcacc 90
>RF00947;mir-929;AAAB01008089.1/34548-34645 180454:Anopheles
gambiae str. PEST
Length = 98
Score = 168 bits (85), Expect = 7e-42
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 1 cctacgcgtgggattaaattgactctagtagggagtccttttatacgagcgactccctaa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cctactcgtgggattaaattgactctagtagggagtccttttatacgagcgactccctaa 61
Query: 61 cggagtcagattgattccggtagtgcacc 89
|||||||||||||||||||||||||||||
Sbjct: 62 cggagtcagattgattccggtagtgcacc 90
>RF00947;mir-929;AAGE02012461.1/76734-76639 7159:Aedes aegypti
(yellow fever mosquito)
Length = 96
Score = 95.6 bits (48), Expect = 9e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattgat 75
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattgaa 76
Query: 76 tccggtag 83
|||||||
Sbjct: 77 cccggtag 84
>RF00947;mir-929;AAWU01005610.1/5708-5613 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 96
Score = 93.7 bits (47), Expect = 4e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
>RF00947;mir-929;AAFS01002785.1/3282-3188 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 93.7 bits (47), Expect = 4e-19
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 74
>RF00947;mir-929;AABU01002551.1/121293-121386 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 87.7 bits (44), Expect = 2e-17
Identities = 56/59 (94%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcctttaat--gagcgactccctaacggagtcagattga 73
>RF00947;mir-929;AANI01014363.1/204913-205006 7244:Drosophila
virilis
Length = 94
Score = 87.7 bits (44), Expect = 2e-17
Identities = 56/59 (94%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcctttca--cgagcgactccctaacggagtcagattga 73
>RF00947;mir-929;AAQB01008629.1/27335-27241 7260:Drosophila
willistoni
Length = 95
Score = 85.7 bits (43), Expect = 9e-17
Identities = 56/59 (94%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttt-atataagcgactccctaacggagtcagattga 74
>RF00947;mir-929;AAPU01011179.1/143817-143911 7230:Drosophila
mojavensis
Length = 95
Score = 69.9 bits (35), Expect = 5e-12
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcctttt-ttttaacgactccctaacggagtcagattga 74
>RF00947;mir-929;AAZO01002930.1/51339-51440 121224:Pediculus
humanus corporis (human body louse)
Length = 102
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 gcgactccctaacggagtcagattga 74
||||||||||||||||||||||||||
Sbjct: 56 gcgactccctaacggagtcagattga 81
>RF00947;mir-929;AAJJ01001068.1/14929-15025 7070:Tribolium
castaneum (red flour beetle)
Length = 97
Score = 52.0 bits (26), Expect = 1e-06
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttt--tatacgagcgactccctaacggagtcagattg 73
||||||||||||||||||||||| || | || |||||||||||||||||||||| |||
Sbjct: 17 aaattgactctagtagggagtccgttacttta-tagcgactccctaacggagtcaggttg 75
Query: 74 a 74
|
Sbjct: 76 a 76
>RF00947;mir-929;ABLF01011736.1/10860-10764 7029:Acyrthosiphon
pisum (pea aphid)
Length = 97
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcctt 40
|||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcctt 41
>RF00947;mir-929;BAAB01013302.1/660-751 7091:Bombyx mori (domestic
silkworm)
Length = 92
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 ttaaattgactctagtagggagtcc 38
|||||||||||||||||||||||||
Sbjct: 15 ttaaattgactctagtagggagtcc 39
>RF00947;mir-929;AAZX01003135.1/832-932 7425:Nasonia vitripennis
(jewel wasp)
Length = 101
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcc 38
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
>RF00947;mir-929;AADG05005366.1/7427-7326 7460:Apis mellifera
(honey bee)
Length = 102
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcc 38
|||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcc 39
