miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00725;mir-iab-4;ABKP02025153.1/22654-22737 377271:Anopheles
gambiae M
Length = 84
Score = 167 bits (84), Expect = 3e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 gtgccgcttcatgaacgtatactgaatgtatcctgagtgctacttatccggtataccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgccgcttcatgaacgtatactgaatgtatcctgagtgctacttatccggtataccttc 60
Query: 61 agtatacgtaacaagaggcgacac 84
||||||||||||||||||||||||
Sbjct: 61 agtatacgtaacaagaggcgacac 84
>RF00725;mir-iab-4;AAPU01010953.1/219687-219770 7230:Drosophila
mojavensis
Length = 84
Score = 87.7 bits (44), Expect = 2e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 15 acgtatactgaatgtatcctgagtgctacttatccggtataccttcagtatacgtaacaa 74
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 15 acgtatactgaatgtatcctgagtgtatcctatccggtataccttcagtatacgtaacac 74
Query: 75 gagg 78
||||
Sbjct: 75 gagg 78
>RF00725;mir-iab-4;AAJJ01001135.1/10616-10533 7070:Tribolium
castaneum (red flour beetle)
Length = 84
Score = 81.8 bits (41), Expect = 1e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 15 acgtatactgaatgtatcctgagtgctacttatccggtataccttcagtatacgtaacaa 74
||||||||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 15 acgtatactgaatgtatcctgagtgttttctgtccggtataccttcagtatacgtaacag 74
Query: 75 gaggc 79
|||||
Sbjct: 75 gaggc 79
>RF00725;mir-iab-4;AADK01004318.1/3463-3550 7091:Bombyx mori
(domestic silkworm)
Length = 88
Score = 75.8 bits (38), Expect = 8e-14
Identities = 57/63 (90%), Gaps = 4/63 (6%)
Strand = Plus / Plus
Query: 15 acgtatactgaatgtatcctgagtgc----tacttatccggtataccttcagtatacgta 70
|||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 15 acgtatactgaatgtatcctgagtgcgcgattcttgtccggtataccttcagtatacgta 74
Query: 71 aca 73
|||
Sbjct: 75 aca 77
>RF00725;mir-iab-4;ABJB010512107.1/48251-48167 6945:Ixodes
scapularis (black-legged tick)
Length = 85
Score = 67.9 bits (34), Expect = 2e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 16 cgtatactgaatgtatcctgagtgct-acttatccggtataccttcagtatacgtaac 72
|||||||||| ||||||||||||| | | || ||||||||||||||||||||||||||
Sbjct: 16 cgtatactgagtgtatcctgagtgtttaattttccggtataccttcagtatacgtaac 73
>RF00725;mir-iab-4;ABLF01001794.1/37283-37372 7029:Acyrthosiphon
pisum (pea aphid)
Length = 90
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 47 tccggtataccttcagtatacgtaaca 73
|||||||||||||||||||||||||||
Sbjct: 53 tccggtataccttcagtatacgtaaca 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 acgtatactgaatgtatcctgagtgc 40
||||||||| ||||||||||||||||
Sbjct: 15 acgtatactaaatgtatcctgagtgc 40
