miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00047;mir-2;AADG05000005.1/25311-25372 7460:Apis mellifera
(honey bee)
Length = 62
Score = 123 bits (62), Expect = 5e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 28 cgatacatcaaattggttgtggaatgtttcgagtcatatcacagccattttgatgagctt 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgatacatcaaattggttgtggaatgtttcgagtcatatcacagccattttgatgagctt 60
Query: 88 gg 89
||
Sbjct: 61 gg 62
>RF00047;mir-2;AAPU01011022.1/363976-364043 7230:Drosophila
mojavensis
Length = 68
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 agtcatatcacagccattttgatgag 84
||||||||||||||||||||||||||
Sbjct: 38 agtcatatcacagccattttgatgag 63
>RF00047;mir-2;AAIZ01000548.1/11342-11275 7234:Drosophila
persimilis
Length = 68
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tcatatcacagccattttgatgag 84
||||||||||||||||||||||||
Sbjct: 40 tcatatcacagccattttgatgag 63
>RF00047;mir-2;AE014297.2/11243334-11243266 7227:Drosophila
melanogaster (fruit fly)
Length = 69
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tcatatcacagccattttgatgag 84
||||||||||||||||||||||||
Sbjct: 41 tcatatcacagccattttgatgag 64
>RF00047;mir-2;AAJJ01001714.1/2416-2480 7070:Tribolium castaneum
(red flour beetle)
Length = 65
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 63 atatcacagccattttgatgagcttgg 89
|||||||||||| ||||||||||||||
Sbjct: 39 atatcacagccactttgatgagcttgg 65
>RF00047;mir-2;AAPP01016552.1/52617-52684 7217:Drosophila
ananassae
Length = 68
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 60 gtcatatcacagccattttgatgagcttgg 89
||||||||||||||||||||| ||| ||||
Sbjct: 39 gtcatatcacagccattttgacgagtttgg 68
