miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00711;mir-449;AADG05001988.1/87357-87449 7460:Apis mellifera
(honey bee)
Length = 93
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 8 gcgattggcatgttggcagtgttgttagctggttgtgtggctacattgtatatacgaccg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcgattggcatgttggcagtgttgttagctggttgtgtggctacattgtatatacgaccg 62
Query: 68 ctatcggcactgcaattatgacgatcgtagg 98
|||||||||||||||||||||||||||||||
Sbjct: 63 ctatcggcactgcaattatgacgatcgtagg 93
>RF00711;mir-449;AAZX01003771.1/10900-10991 7425:Nasonia
vitripennis (jewel wasp)
Length = 92
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 18 tgttggcagtgttgttagctggttgtgtggctacattgtatatacgaccgctatcggcac 77
|||||||||||| ||||||||||||||| ||| || | | ||||||||||||| |||
Sbjct: 13 tgttggcagtgtggttagctggttgtgtagctt-atagaaagcacgaccgctatcgacac 71
Query: 78 tgcaattatgacg 90
|||||||||||||
Sbjct: 72 tgcaattatgacg 84
>RF00711;mir-449;AANI01014607.1/367710-367617 7244:Drosophila
virilis
Length = 94
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgtggc 48
|||||||||| ||||||||||||||||||
Sbjct: 15 ttggcagtgtggttagctggttgtgtggc 43
>RF00711;mir-449;AAZO01004205.1/1293-1391 121224:Pediculus humanus
corporis (human body louse)
Length = 99
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgtgg 47
|||||||||| |||||||||||||||||
Sbjct: 15 ttggcagtgtggttagctggttgtgtgg 42
>RF00711;mir-449;BABH01019946.1/3350-3261 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 19 gttggcagtgttgttagctggttgtgt 45
||||||||||| |||||||||||||||
Sbjct: 14 gttggcagtgtggttagctggttgtgt 40
>RF00711;mir-449;ABKQ02014207.1/244697-244790 377270:Anopheles
gambiae S
Length = 94
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tggcagtgttgttagctggttgtgtgg 47
||||||||| |||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtgtgg 43
>RF00711;mir-449;AAPQ01006467.1/383882-383780 7220:Drosophila
erecta
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 15 ttggcagtgtggttagctggttgtgt 40
>RF00711;mir-449;AAQB01008630.1/408110-408004 7260:Drosophila
willistoni
Length = 107
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 15 ttggcagtgtggttagctggttgtgt 40
>RF00711;mir-449;AAFS01000411.1/37510-37407 46245:Drosophila
pseudoobscura pseudoobscura
Length = 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 15 ttggcagtgtggttagctggttgtgt 40
>RF00711;mir-449;AAPP01019533.1/13885-13988 7217:Drosophila
ananassae
Length = 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 15 ttggcagtgtggttagctggttgtgt 40
>RF00711;mir-449;AASS01031694.1/773-875 7240:Drosophila simulans
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 15 ttggcagtgtggttagctggttgtgt 40
