miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;AADG05005118.1/28931-28831 7460:Apis mellifera
(honey bee)
Length = 101
Score = 196 bits (99), Expect = 4e-50
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 2 acttcataggccaggttggcgacgcgtattcttggggaattaacacacatttgcgctgtt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttcataggccaggttggcgacgcgtattcttggggaattaacacacatttgcgctgtt 60
Query: 62 attgcttgagaatacacgtagtttgcctggtcgttcact 100
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgcttgagaatacacgtagtttgcctggtcgttcact 99
>RF00694;mir-137;BAAB01088495.1/2035-1935 7091:Bombyx mori
(domestic silkworm)
Length = 101
Score = 87.7 bits (44), Expect = 2e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 23 acgcgtattcttggggaattaacacacatttgcgctgttattgcttgagaatacacgtag 82
|||||||||||||||||||||||||| || || | |||||||||||||||||||||||||
Sbjct: 22 acgcgtattcttggggaattaacacatatgtgagatgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAGE02029705.1/92443-92543 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 69.9 bits (35), Expect = 6e-12
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 15 ggttggcgacgcgtattcttggggaattaacacaca-tttgcgctgttattgcttgagaa 73
||||||| ||||||||||||||| |||||||||| ||| | ||||||||||||||||
Sbjct: 14 ggttggccacgcgtattcttgggttattaacacactgtttatgttgttattgcttgagaa 73
Query: 74 tacacgtagtt 84
|||||||||||
Sbjct: 74 tacacgtagtt 84
>RF00694;mir-137;AAZO01004444.1/55394-55292 121224:Pediculus
humanus corporis (human body louse)
Length = 103
Score = 65.9 bits (33), Expect = 9e-11
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 23 acgcgtattcttggggaattaacaca-catttgcgctgttattgcttgagaatacacgta 81
|||||||||||||||||||||||||| || | | ||||||||||||||||||||||||
Sbjct: 23 acgcgtattcttggggaattaacacaccaaaagagatgttattgcttgagaatacacgta 82
Query: 82 g 82
|
Sbjct: 83 g 83
>RF00694;mir-137;ABKQ02013341.1/3039-2937 377270:Anopheles gambiae
S
Length = 103
Score = 61.9 bits (31), Expect = 1e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 15 ggttggcgacgcgtattcttggggaattaacacaca-tttgcgctgttattgcttgagaa 73
||||||| ||||||||||||||| | |||||||| ||| | ||||||||||||||||
Sbjct: 14 ggttggccacgcgtattcttgggttactaacacactgtttatgttgttattgcttgagaa 73
Query: 74 tacacgtagtt 84
|||||||||||
Sbjct: 74 tacacgtagtt 84
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 54 gcgctgttattgcttgagaatacacgtagt 83
||||||||||||||||||||||||||||||
Sbjct: 52 gcgctgttattgcttgagaatacacgtagt 81
>RF00694;mir-137;AAJJ01002111.1/15264-15166 7070:Tribolium
castaneum (red flour beetle)
Length = 99
Score = 58.0 bits (29), Expect = 2e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 27 gtattcttggggaattaacacacattt-gcgctgttattgcttgagaatacacgtag 82
||||||||||| |||||||||| ||| | | |||||||||||||||||||||||||
Sbjct: 25 gtattcttgggtaattaacacatattcagggatgttattgcttgagaatacacgtag 81
>RF00694;mir-137;ABLF01001266.1/4970-5069 7029:Acyrthosiphon pisum
(pea aphid)
Length = 100
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 57 ctgttattgcttgagaatacacgtagtt 84
||||||||||||||||||||||||||||
Sbjct: 56 ctgttattgcttgagaatacacgtagtt 83
>RF00694;mir-137;AAFS01000057.1/187400-187500 46245:Drosophila
pseudoobscura pseudoobscura
Length = 101
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagttt 85
||||||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagttt 84
>RF00694;mir-137;AAQB01009904.1/3815-3716 7260:Drosophila
willistoni
Length = 100
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;AAPP01018794.1/261725-261826 7217:Drosophila
ananassae
Length = 102
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;AASR01013769.1/615-715 7240:Drosophila simulans
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagtt 83
>RF00694;mir-137;AANI01011213.1/2061-1961 7244:Drosophila virilis
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;AAPU01010131.1/289658-289758 7230:Drosophila
mojavensis
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;AAGJ02120953.1/3113-3013 7668:Strongylocentrotus
purpuratus
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagt 83
||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagt 83
>RF00694;mir-137;AAPN01296459.1/4449-4348 9258:Ornithorhynchus
anatinus (platypus)
Length = 102
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 gcgctgttattgcttgagaatacacgtagt 83
||||||||||||||||||||||| ||||||
Sbjct: 52 gcgctgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;ABJB010513068.1/3224-3122 6945:Ixodes scapularis
(black-legged tick)
Length = 103
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 gctgttattgcttgagaatacacgt 80
|||||||||||||||||||||||||
Sbjct: 57 gctgttattgcttgagaatacacgt 81
>RF00694;mir-137;AAWZ01010620.1/48359-48459 28377:Anolis
carolinensis (green anole)
Length = 101
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagtt 84
||||||||||||||||||| |||||||
Sbjct: 56 tgttattgcttgagaatacgcgtagtt 82
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagt 83
||||||||||||||||||| ||||||
Sbjct: 56 tgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagt 83
||||||||||||||||||| ||||||
Sbjct: 57 tgttattgcttgagaatacgcgtagt 82
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 tgttattgcttgagaatacacgtagt 83
||||||||||||||||||| ||||||
Sbjct: 56 tgttattgcttgagaatacgcgtagt 81
