miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00001;5S_rRNA;AC226819.1/57809-57697 63629:Oryza minuta
          Length = 113

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                      
Query: 38 gttaagcgtgcttggcttagagaaattttgggatgggtgaccga 81
          |||||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 43 gttaagcgtgcttggcctggagaaatttcgggatgggtgaccga 86

>RF00001;5S_rRNA;DQ788719.1/228-339 3888:Pisum sativum (pea)
          Length = 112

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 38 gttaagcgtgcttggcttagagaaattttgggatgggtgacc 79
          |||||||||||||| ||| ||| | | |||||||||||||||
Sbjct: 43 gttaagcgtgcttgacttggagtagtattgggatgggtgacc 84