miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AACV01016515.1/26029-25865 39947:Oryza sativa
Japonica Group
Length = 165
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||||||||||
Sbjct: 149 tttgaccattcgttttattcaaaatatttat 119
>RF01062;MIR812;AACV01007519.1/11495-11664 39947:Oryza sativa
Japonica Group
Length = 170
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||||||||||||||||||| ||||||
Sbjct: 17 tttgaccactcgttttattcaaaaaatttat 47
>RF01062;MIR812;AACV01023720.1/2532-2702 39947:Oryza sativa
Japonica Group
Length = 171
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaatatttat 47
>RF01062;MIR812;AP008213.1/19404924-19404759 39947:Oryza sativa
Japonica Group
Length = 166
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||||||||||||||||||| ||||||
Sbjct: 17 tttgaccactcgttttattcaaaaaatttat 47
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatattt 87
|||||||||||||||||||||||| ||||
Sbjct: 150 tttgaccactcgttttattcaaaaaattt 122
>RF01062;MIR812;AAAA02022058.1/13808-13644 39946:Oryza sativa
Indica Group
Length = 165
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaatatttat 47
>RF01062;MIR812;AP008216.1/8863369-8863537 39947:Oryza sativa
Japonica Group
Length = 169
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||||||||||||||||||| ||||||
Sbjct: 17 tttgaccactcgttttattcaaaaaatttat 47
>RF01058;MIR806;AAAA02027859.1/37306-37546 39946:Oryza sativa
Indica Group
Length = 241
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||||||||||
Sbjct: 51 tttgaccattcgttttattcaaaatatttat 81
>RF01062;MIR812;ABXC01004642.1/156730-156901 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 56 aactttgaccactcgttttattcaaaatatttat 89
|||||||||||||||| |||||||||| ||||||
Sbjct: 14 aactttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AAAA02030099.1/1816-1987 39946:Oryza sativa Indica
Group
Length = 172
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatattt 87
|||||||||||||||||||||||| ||||
Sbjct: 156 tttgaccactcgttttattcaaaaaattt 128
>RF01062;MIR812;AAAA02028004.1/8904-9071 39946:Oryza sativa Indica
Group
Length = 168
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattt 87
||||||||||||| |||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaatattt 45
>RF01062;MIR812;AP004573.3/131013-131180 39947:Oryza sativa
Japonica Group
Length = 168
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattt 87
|||||||||||||||||||||||| ||||
Sbjct: 17 tttgaccactcgttttattcaaaaaattt 45
>RF01062;MIR812;AC145325.3/42995-43168 39947:Oryza sativa Japonica
Group
Length = 174
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatattt 87
|||||| ||||||||||||||||||||||
Sbjct: 158 tttgactactcgttttattcaaaatattt 130
>RF01062;MIR812;AACV01020977.1/6837-7003 39947:Oryza sativa
Japonica Group
Length = 167
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattt 87
||||||||||||| |||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaatattt 45
>RF01062;MIR812;AAAA02010120.1/17487-17653 39946:Oryza sativa Indica
Group
Length = 167
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatattt 87
||||||||||||| |||||||||||||||
Sbjct: 151 tttgaccactcgtcttattcaaaatattt 123
>RF01062;MIR812;AP003833.3/6318-6483 39947:Oryza sativa Japonica
Group
Length = 166
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 57 actttgaccactcgttttattcaaaatatttat 89
||||||||||||||| |||||||||| ||||||
Sbjct: 15 actttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AP008217.1/678398-678569 39947:Oryza sativa
Japonica Group
Length = 172
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattt 87
||||||||||||| |||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaatattt 45
>RF01062;MIR812;AACV01016979.1/4172-4005 39947:Oryza sativa
Japonica Group
Length = 168
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattt 87
|||||||||||||||||||||||| ||||
Sbjct: 17 tttgaccactcgttttattcaaaaaattt 45
>RF01058;MIR806;AAAA02011733.1/14977-15220 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatattt 87
||||||||||||| |||||||||||||||
Sbjct: 193 tttgaccactcgtcttattcaaaatattt 165
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 57 actttgaccactcgttttattcaaaatatttat 89
||||||||||||||| |||||||||| ||||||
Sbjct: 187 actttgaccactcgtcttattcaaaaaatttat 155
>RF01062;MIR812;AAAA02037866.1/4033-4206 39946:Oryza sativa Indica
Group
Length = 174
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaaaa 40
>RF01062;MIR812;AACV01004921.1/5457-5627 39947:Oryza sativa
Japonica Group
Length = 171
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaaaa 40
>RF01062;MIR812;AP008218.1/9315658-9315825 39947:Oryza sativa
Japonica Group
Length = 168
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaaaa 40
>RF01062;MIR812;AAAA02032813.1/268-97 39946:Oryza sativa Indica
Group
Length = 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaaaa 40
>RF01062;MIR812;AACV01023580.1/13642-13468 39947:Oryza sativa
Japonica Group
Length = 175
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 159 tttgaccactcgttttattcaaaa 136
>RF01062;MIR812;CR855227.1/90408-90580 4530:Oryza sativa (rice)
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaaaa 40
>RF01062;MIR812;AACV01012525.1/20132-19964 39947:Oryza sativa
Japonica Group
Length = 169
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaaaa 40
>RF01062;MIR812;AL713911.3/24314-24143 4530:Oryza sativa (rice)
Length = 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaaaa 40
>RF01062;MIR812;ABRL01000263.1/1709-1879 65489:Oryza barthii
Length = 171
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 155 tttgaccactcgttttattcaaaa 132
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaa 82
||||||||||||||||||||||||
Sbjct: 188 tttgaccactcgttttattcaaaa 165
>RF01062;MIR812;ABXC01006208.1/52786-52612 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;ABXC01000470.1/249858-249686 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;ABXC01001803.1/39100-38927 4558:Sorghum bicolor
(sorghum)
Length = 174
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;ABXC01001786.1/383060-382891 4558:Sorghum bicolor
(sorghum)
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AAAA02010849.1/28893-28725 39946:Oryza sativa
Indica Group
Length = 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AAAA02032164.1/21937-21766 39946:Oryza sativa Indica
Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 156 tttgaccactcgtcttattcaaaaaatttat 126
>RF01062;MIR812;AAAA02038910.1/3000-3177 39946:Oryza sativa Indica
Group
Length = 178
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| |||||||||||||||| |||||
Sbjct: 16 tttgaccattcgttttattcaaaatttttat 46
>RF01062;MIR812;AAAA02030995.1/27319-27148 39946:Oryza sativa
Indica Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||||| ||||||||||||| ||||||
Sbjct: 17 tttgaccacttgttttattcaaaaaatttat 47
>RF01062;MIR812;AACV01006174.1/18299-18135 39947:Oryza sativa
Japonica Group
Length = 165
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AACV01005421.1/28557-28726 39947:Oryza sativa
Japonica Group
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||| ||||||
Sbjct: 154 tttgaccattcgttttattcaaaaaatttat 124
>RF01062;MIR812;AC120983.6/43339-43170 39947:Oryza sativa Japonica
Group
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AACV01004102.1/7215-7042 39947:Oryza sativa
Japonica Group
Length = 174
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;ABRL01000119.1/394-558 65489:Oryza barthii
Length = 165
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AP008215.1/19303621-19303451 39947:Oryza sativa
Japonica Group
Length = 171
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AACV01023550.1/1070-1239 39947:Oryza sativa
Japonica Group
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AAAA02022094.1/9064-9251 39946:Oryza sativa Indica
Group
Length = 188
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| |||| |||||||||||||||||
Sbjct: 172 tttgaccattcgtcttattcaaaatatttat 142
>RF01062;MIR812;FJ581045.1/130260-130099 4529:Oryza rufipogon
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AP008218.1/7146476-7146309 39947:Oryza sativa
Japonica Group
Length = 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AP008218.1/21453608-21453436 39947:Oryza sativa
Japonica Group
Length = 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AAAA02005635.1/37148-37317 39946:Oryza sativa Indica
Group
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| |||| |||||||||||||||||
Sbjct: 154 tttgaccattcgtcttattcaaaatatttat 124
>RF01062;MIR812;AP004308.3/114559-114394 39947:Oryza sativa
Japonica Group
Length = 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AACV01009608.1/52411-52239 39947:Oryza sativa
Japonica Group
Length = 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||| ||||||
Sbjct: 157 tttgaccattcgttttattcaaaaaatttat 127
>RF01062;MIR812;AP008207.1/23557018-23556847 39947:Oryza sativa
Japonica Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||| ||||||
Sbjct: 156 tttgaccattcgttttattcaaaaaatttat 126
>RF01062;MIR812;AACV01007443.1/12605-12434 39947:Oryza sativa
Japonica Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||| ||||||
Sbjct: 156 tttgaccattcgttttattcaaaagatttat 126
>RF01062;MIR812;AACV01008600.1/14273-14441 39947:Oryza sativa
Japonica Group
Length = 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| |||||||||||||||| |||||
Sbjct: 15 tttgaccattcgttttattcaaaatttttat 45
>RF01062;MIR812;AC145322.2/13007-12834 39947:Oryza sativa Japonica
Group
Length = 174
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01062;MIR812;AP008215.1/8802153-8801982 39947:Oryza sativa
Japonica Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| |||||||||||||||| |||||
Sbjct: 17 tttgaccattcgttttattcaaaatttttat 47
>RF01062;MIR812;AP004738.3/137954-138124 39947:Oryza sativa
Japonica Group
Length = 171
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||||||||| |||| ||||||
Sbjct: 17 tttgaccactcgttttatttaaaaaatttat 47
>RF01062;MIR812;AC122143.2/133354-133183 39947:Oryza sativa
Japonica Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaaaaatttat 47
>RF01058;MIR806;AAAA02005666.1/25598-25367 39946:Oryza sativa Indica
Group
Length = 232
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| ||||||||||| |||||
Sbjct: 182 tttgaccactcgtcttattcaaaatttttat 152
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica Group
Length = 242
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 191 tttgaccactcgtcttattcaaaaaatttat 161
>RF01058;MIR806;AL731620.2/83760-83522 39947:Oryza sativa Japonica
Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatat 85
|||||||| ||||||||||||||||||
Sbjct: 49 tttgaccattcgttttattcaaaatat 75
>RF01058;MIR806;AAAA02003280.1/16515-16755 39946:Oryza sativa
Indica Group
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||| ||||||
Sbjct: 51 tttgaccattcgttttattcaaaaaatttat 81
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| |||||||||||||||| |||||
Sbjct: 191 tttgaccattcgttttattcaaaatttttat 161
>RF01058;MIR806;AP003504.1/120118-120357 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||| ||||||
Sbjct: 51 tttgaccattcgttttattcaaaaaatttat 81
>RF01058;MIR806;AL732379.5/11764-11525 4530:Oryza sativa (rice)
Length = 240
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| ||||||||||||||| ||||||
Sbjct: 51 tttgaccattcgttttattcaaaagatttat 81
>RF01058;MIR806;ABRL01002048.1/3759-3519 65489:Oryza barthii
Length = 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| || |||||||||||||||||||
Sbjct: 191 tttgaccattcattttattcaaaatatttat 161
>RF01058;MIR806;AAAA02005296.1/2462-2244 39946:Oryza sativa Indica
Group
Length = 219
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
|||||||| |||||||||||||||| |||||
Sbjct: 169 tttgaccattcgttttattcaaaatttttat 139
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatatttat 89
||||||||||||| |||||||||| ||||||
Sbjct: 191 tttgaccactcgtcttattcaaaaaatttat 161
>RF01062;MIR812;AAAA02010398.1/3247-3417 39946:Oryza sativa Indica
Group
Length = 171
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 58 ctttgaccactcgttttattcaaaatattt 87
|||||||||||||| |||||||||| ||||
Sbjct: 16 ctttgaccactcgtcttattcaaaaaattt 45
>RF01062;MIR812;AAAA02030716.1/2093-1923 39946:Oryza sativa Indica
Group
Length = 171
Score = 44.1 bits (22), Expect = 9e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaa 80
||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaa 38
>RF01062;MIR812;AAAA02020519.1/16817-16988 39946:Oryza sativa Indica
Group
Length = 172
Score = 44.1 bits (22), Expect = 9e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 62 gaccactcgttttattcaaaat 83
||||||||||||||||||||||
Sbjct: 153 gaccactcgttttattcaaaat 132
>RF01062;MIR812;AACV01006015.1/16796-16959 39947:Oryza sativa
Japonica Group
Length = 164
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattta 88
||||||||||||| ||||||||| ||||||
Sbjct: 17 tttgaccactcgtcttattcaaattattta 46
>RF01062;MIR812;AL731623.3/48930-48760 39947:Oryza sativa Japonica
Group
Length = 171
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatattta 88
|||||||| |||| ||||||||||||||||
Sbjct: 155 tttgaccattcgtcttattcaaaatattta 126
>RF01062;MIR812;AACV01002753.1/4109-4282 39947:Oryza sativa
Japonica Group
Length = 174
Score = 44.1 bits (22), Expect = 9e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaa 80
||||||||||||||||||||||
Sbjct: 17 tttgaccactcgttttattcaa 38
>RF01058;MIR806;AAAA02015103.1/22736-22973 39946:Oryza sativa
Indica Group
Length = 238
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattta 88
|||||||| ||||||||||||||| |||||
Sbjct: 51 tttgaccattcgttttattcaaaaaattta 80
>RF01058;MIR806;AL713901.3/92479-92719 4530:Oryza sativa (rice)
Length = 241
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 tttgaccactcgttttattcaaaatattta 88
|||||||| |||||||||||||||| ||||
Sbjct: 191 tttgaccattcgttttattcaaaattttta 162
>RF01058;MIR806;AP008211.1/5843502-5843264 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattta 88
||||||||||||| |||||||||| |||||
Sbjct: 51 tttgaccactcgtcttattcaaaaaattta 80
>RF01058;MIR806;AAAA02017197.1/21108-21348 39946:Oryza sativa
Indica Group
Length = 241
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattta 88
|||||||| ||||||||||||||| |||||
Sbjct: 52 tttgaccattcgttttattcaaaaaattta 81
>RF01058;MIR806;AP008208.1/21166183-21165939 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattta 88
|||||||| ||||||||||||||| |||||
Sbjct: 51 tttgaccattcgttttattcaaaaaattta 80
>RF01058;MIR806;CR855161.1/19052-18813 4530:Oryza sativa (rice)
Length = 240
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattta 88
|||||||| |||| ||||||||||||||||
Sbjct: 51 tttgaccattcgtcttattcaaaatattta 80
>RF01058;MIR806;AP004993.3/124207-123967 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 59 tttgaccactcgttttattcaaaatattta 88
||||||||||||| |||||||||| |||||
Sbjct: 51 tttgaccactcgtcttattcaaaaaattta 80
