miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01912;mir-2807;BAAB01000897.1/995-1111 7091:Bombyx mori
(domestic silkworm)
Length = 117
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 ccgctatgggcgctgttccaattccatac 68
|||||| ||||||||||||||||||||||
Sbjct: 61 ccgctaggggcgctgttccaattccatac 89
>RF01912;mir-2807;BABH01031438.1/18061-18177 7091:Bombyx mori
(domestic silkworm)
Length = 117
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 ccgctatgggcgctgttccaattccatac 68
|||||| ||||||||||||||||||||||
Sbjct: 61 ccgctaggggcgctgttccaattccatac 89
>RF01912;mir-2807;AADK01001335.1/6303-6187 7091:Bombyx mori
(domestic silkworm)
Length = 117
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 ccgctatgggcgctgttccaattccatac 68
||||||||||||||||||||| |||||||
Sbjct: 61 ccgctatgggcgctgttccaactccatac 89
>RF01912;mir-2807;AADK01002245.1/17232-17349 7091:Bombyx mori
(domestic silkworm)
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 31 ccttcgttt-ccgctatgggcgctgttccaattccatac 68
||||||||| |||||| |||||||||||||| |||||||
Sbjct: 52 ccttcgtttgccgctaggggcgctgttccaactccatac 90
>RF01912;mir-2807;BAAB01061000.1/901-784 7091:Bombyx mori
(domestic silkworm)
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 31 ccttcgttt-ccgctatgggcgctgttccaattccatac 68
||||||||| |||||| |||||||||||||| |||||||
Sbjct: 52 ccttcgtttgccgctaggggcgctgttccaactccatac 90
>RF01912;mir-2807;BABH01033249.1/9674-9557 7091:Bombyx mori
(domestic silkworm)
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 31 ccttcgttt-ccgctatgggcgctgttccaattccatac 68
||||||||| |||||||||||||| |||||| |||||||
Sbjct: 52 ccttcgtttgccgctatgggcgctattccaactccatac 90
>RF01912;mir-2807;BAAB01095726.1/1060-1175 7091:Bombyx mori
(domestic silkworm)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 26 gttttccttcgtttccgctatgggcgctgttccaattccatac 68
|||| ||| |||| |||||| |||||||||||||| |||||||
Sbjct: 46 gtttgcctacgttgccgctaggggcgctgttccaaatccatac 88
>RF01912;mir-2807;BABH01019789.1/14561-14676 7091:Bombyx mori
(domestic silkworm)
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 35 cgtttccgctatgggcgctgttccaattccatac 68
||||||||||| |||||||||||| ||| |||||
Sbjct: 55 cgtttccgctaggggcgctgttccgattgcatac 88
