miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00637;mir-276;AAWU01010561.1/6178-6274 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 168 bits (85), Expect = 1e-41
Identities = 94/97 (96%)
Strand = Plus / Plus
Query: 7 gaaagttcacccactagcgaggtatagagttcctatgcgttgtttcgattcgctatccat 66
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 1 gaaagttcacccgctagcgaggtatagagttcctatgcgttgattggattcgctatccat 60
Query: 67 aggaacttcataccgtgctcttggatggctttccgtt 103
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggaacttcataccgtgctcttggatggctttccgtt 97
>RF00637;mir-276;AAGE02000417.1/11129-11035 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 62 tccataggaacttcataccgtgctcttggatggctt 97
||||||||||||||||||||||||||||||| ||||
Sbjct: 54 tccataggaacttcataccgtgctcttggattgctt 89
>RF00637;mir-276;ABKP02026752.1/53325-53226 377271:Anopheles
gambiae M
Length = 100
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 55 ttcgctatccataggaacttcataccgtgctcttggat 92
||||||| |||||||||||||||||||||||||||||
Sbjct: 52 ttcgctactcataggaacttcataccgtgctcttggat 89
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 acccactagcgaggtatagagttcctatg 43
|||||| ||||||||||||||||||||||
Sbjct: 9 acccaccagcgaggtatagagttcctatg 37
>RF00637;mir-276;ABKQ02021479.1/6963-6864 377270:Anopheles gambiae
S
Length = 100
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 55 ttcgctatccataggaacttcataccgtgctcttggat 92
||||||| |||||||||||||||||||||||||||||
Sbjct: 52 ttcgctactcataggaacttcataccgtgctcttggat 89
>RF00637;mir-276;AAZO01003220.1/6657-6747 121224:Pediculus humanus
corporis (human body louse)
Length = 91
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttggatg 93
||||||||||||||||||||||||||||
Sbjct: 53 taggaacttcataccgtgctcttggatg 80
>RF00637;mir-276;ABKQ02021477.1/23012-22918 377270:Anopheles
gambiae S
Length = 95
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttggat 92
|||||||||||||||||||||||||||
Sbjct: 58 taggaacttcataccgtgctcttggat 84
>RF00637;mir-276;AAJJ01000143.1/58311-58223 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttggat 92
|||||||||||||||||||||||||||
Sbjct: 51 taggaacttcataccgtgctcttggat 77
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 ccactagcgaggtatagagttccta 41
|||||||||||||||||||||||||
Sbjct: 10 ccactagcgaggtatagagttccta 34
>RF00637;mir-276;ABLF01003513.1/4658-4754 7029:Acyrthosiphon pisum
(pea aphid)
Length = 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttgga 91
||||||||||||||||||||||||||
Sbjct: 60 taggaacttcataccgtgctcttgga 85
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 ccactagcgaggtatagagttccta 41
|||||||||||||||||||||||||
Sbjct: 11 ccactagcgaggtatagagttccta 35
>RF00637;mir-276;AAZX01001999.1/5300-5391 7425:Nasonia vitripennis
(jewel wasp)
Length = 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttgga 91
||||||||||||||||||||||||||
Sbjct: 54 taggaacttcataccgtgctcttgga 79
>RF00637;mir-276;AADG05002822.1/76702-76793 7460:Apis mellifera
(honey bee)
Length = 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttgga 91
||||||||||||||||||||||||||
Sbjct: 54 taggaacttcataccgtgctcttgga 79
>RF00637;mir-276;AANI01017424.1/110847-110939 7244:Drosophila
virilis
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttgga 91
||||||||||||||||||||||||||
Sbjct: 56 taggaacttcataccgtgctcttgga 81
>RF00637;mir-276;AADK01021256.1/890-979 7091:Bombyx mori (domestic
silkworm)
Length = 90
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 ccactagcgaggtatagagttccta 41
|||||||||||||||||||||||||
Sbjct: 12 ccactagcgaggtatagagttccta 36
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttgg 90
|||||||||||||||||||||||||
Sbjct: 52 taggaacttcataccgtgctcttgg 76
>RF00637;mir-276;AAGE02007617.1/38970-39063 7159:Aedes aegypti
(yellow fever mosquito)
Length = 94
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttgg 90
|||||||||||||||||||||||||
Sbjct: 57 taggaacttcataccgtgctcttgg 81
>RF00637;mir-276;AADE01001409.1/12453-12359 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttggatggct 96
||||||||| |||||||||||||||| ||||
Sbjct: 58 taggaacttaataccgtgctcttggagggct 88
>RF00637;mir-276;AAPU01011641.1/29322-29227 7230:Drosophila
mojavensis
Length = 96
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttggatggct 96
||||||||| |||||||||||||||| ||||
Sbjct: 59 taggaacttaataccgtgctcttggagggct 89
>RF00637;mir-276;AE014296.4/10312890-10312983 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 66 taggaacttcataccgtgctcttgga 91
||||||||| ||||||||||||||||
Sbjct: 57 taggaacttaataccgtgctcttgga 82
