miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00732;mir-305;AAGE02001651.1/105678-105765 7159:Aedes aegypti
(yellow fever mosquito)
Length = 88
Score = 167 bits (84), Expect = 3e-41
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1 aatgtcacatgtctattgtacttcatcaggtgctctggttgctttcgatacccggcacat 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 aatgtcacatgtctattgtacttcatcaggtgctctggttgttttcgatacccggcacat 60
Query: 61 gttggagtacacttaatgtgctgacagt 88
||||||||||||||||||||||||||||
Sbjct: 61 gttggagtacacttaatgtgctgacagt 88
>RF00732;mir-305;AAAB01008980.1/2241127-2241216 180454:Anopheles
gambiae str. PEST
Length = 90
Score = 93.7 bits (47), Expect = 4e-19
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 3 tgtcacatgtctattgtacttcatcaggtgctctggttgcttt--cgatacccggcacat 60
||||||||||||||||||||||||||||||||||||| | ||| | |||||||||||
Sbjct: 3 tgtcacatgtctattgtacttcatcaggtgctctggtggatttgagaaaacccggcacat 62
Query: 61 gttggagtacacttaatgtgctgaca 86
||||||||||||| |||||||||||
Sbjct: 63 gttggagtacactctatgtgctgaca 88
>RF00732;mir-305;AAJJ01000649.1/41392-41476 7070:Tribolium
castaneum (red flour beetle)
Length = 85
Score = 73.8 bits (37), Expect = 3e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 3 tgtcacatgtctattgtacttcatcaggtgctctggt 39
|||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgtcacatgtctattgtacttcatcaggtgctctggt 39
>RF00732;mir-305;AAPP01015737.1/35950-36037 7217:Drosophila
ananassae
Length = 88
Score = 67.9 bits (34), Expect = 2e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 8 catgtctattgtacttcatcaggtgctctggttgctttcgatacccggcacatgttggag 67
|||||||||||||||||||||||||||||||| | || ||||||||||||||| ||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggtgtccaccgtaacccggcacatgttgaag 67
Query: 68 tacact 73
||||||
Sbjct: 68 tacact 73
>RF00732;mir-305;AANI01016257.1/59422-59335 7244:Drosophila
virilis
Length = 88
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 8 catgtctattgtacttcatcaggtgctctggt 39
||||||||||||||||||||||||||||||||
Sbjct: 8 catgtctattgtacttcatcaggtgctctggt 39
>RF00732;mir-305;AADG05001619.1/14219-14305 7460:Apis mellifera
(honey bee)
Length = 87
Score = 58.0 bits (29), Expect = 2e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 15 attgtacttcatcaggtgctctggttgctttcgatacccggcacatgttggag 67
|||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 15 attgtacttcatcaggtgctctgg-tgaactcgatacccggcacctgttggag 66
>RF00732;mir-305;AAZO01007192.1/28953-29038 121224:Pediculus
humanus corporis (human body louse)
Length = 86
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 attgtacttcatcaggtgctctggt 39
|||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctggt 39
>RF00732;mir-305;BABH01005296.1/11892-11978 7091:Bombyx mori
(domestic silkworm)
Length = 87
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 attgtacttcatcaggtgctctggt 39
|||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctggt 39
>RF00732;mir-305;ABJB010539510.1/4555-4465 6945:Ixodes scapularis
(black-legged tick)
Length = 91
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 attgtacttcatcaggtgctctgg 38
||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctgg 38
