miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00814;mir-316;AAWU01024441.1/4794-4714 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 81
Score = 161 bits (81), Expect = 3e-39
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 26 ttgattgatttgtctttttccgcttactgccggtggtgttcgaaagtcccgacagcaaac 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgattgatttgtctttttccgcttactgccggtggtgttcgaaagtcccgacagcaaac 60
Query: 86 agaaaaaggcgcctcaatcaa 106
|||||||||||||||||||||
Sbjct: 61 agaaaaaggcgcctcaatcaa 81
>RF00814;mir-316;AAGE02013460.1/10825-10737 7159:Aedes aegypti
(yellow fever mosquito)
Length = 89
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 24 ttttgattgatttgtctttttccgcttactgccggtggtgttcgaaagtcccgacagcaa 83
|||||||||||||||||||||||||||||||||||||| || |||| || |||||||||
Sbjct: 4 ttttgattgatttgtctttttccgcttactgccggtggcatttgaaattctcgacagcaa 63
Query: 84 acagaaaaaggcgcctcaatcaatt 108
|| ||||||||||||||||||||||
Sbjct: 64 accgaaaaaggcgcctcaatcaatt 88
>RF00814;mir-316;AANI01017487.1/102971-103058 7244:Drosophila
virilis
Length = 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 gatttgtctttttccgcttactg 54
|||||||||||||||||||||||
Sbjct: 12 gatttgtctttttccgcttactg 34
