miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01926;mir-981;AAWU01022546.1/521-633 7176:Culex quinquefasciatus
(southern house mosquito)
Length = 113
Score = 196 bits (99), Expect = 4e-50
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 aaacaccttgtctggatcgggtttcgcggcaaacgggctgtactgattcgtgaaaaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 aaacaccttgtctggatcgggtttcgcggcaaacgggctgtactgattcgtgaaaaatca 68
Query: 61 gttcgttgtcgacgaaacctgcacactgcaaggttgtaa 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gttcgttgtcgacgaaacctgcacactgcaaggttgtaa 107
>RF01926;mir-981;AAGE02007302.1/184866-184756 7159:Aedes aegypti
(yellow fever mosquito)
Length = 111
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 59 cagttcgttgtcgacgaaacctgcacactgcaagg 93
||||||||||||||||||||||||||| |||||||
Sbjct: 65 cagttcgttgtcgacgaaacctgcacattgcaagg 99
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 5 accttgtctggatcgggtttcgcggcaaacgggct 39
|||||| ||||||||||||||||||| ||||||||
Sbjct: 13 accttgcctggatcgggtttcgcggcgaacgggct 47
>RF01926;mir-981;AAPT01018880.1/172410-172517 7222:Drosophila
grimshawi
Length = 108
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 agttcgttgtcgacgaaacctgcacactg 88
|||||||||||||||||||||||| ||||
Sbjct: 63 agttcgttgtcgacgaaacctgcatactg 91
>RF01926;mir-981;AANI01015799.1/578-686 7244:Drosophila virilis
Length = 109
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 agttcgttgtcgacgaaacctgcacactg 88
|||||||||||||||||||||||| ||||
Sbjct: 64 agttcgttgtcgacgaaacctgcatactg 92
>RF01926;mir-981;AAPP01015855.1/4220-4330 7217:Drosophila
ananassae
Length = 111
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 agttcgttgtcgacgaaacctgca 83
||||||||||||||||||||||||
Sbjct: 66 agttcgttgtcgacgaaacctgca 89
>RF01926;mir-981;AAQB01008759.1/20932-21051 7260:Drosophila
willistoni
Length = 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 agttcgttgtcgacgaaacctgca 83
||||||||||||||||||||||||
Sbjct: 74 agttcgttgtcgacgaaacctgca 97
>RF01926;mir-981;AABU01002762.1/8939148-8939258 7227:Drosophila
melanogaster (fruit fly)
Length = 111
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 agttcgttgtcgacgaaacctgca 83
||||||||||||||||||||||||
Sbjct: 66 agttcgttgtcgacgaaacctgca 89
>RF01926;mir-981;AAFS01000238.1/65682-65572 46245:Drosophila
pseudoobscura pseudoobscura
Length = 111
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 agttcgttgtcgacgaaacctgca 83
||||||||||||||||||||||||
Sbjct: 66 agttcgttgtcgacgaaacctgca 89
>RF01926;mir-981;AAPU01008298.1/3476-3586 7230:Drosophila
mojavensis
Length = 111
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 agttcgttgtcgacgaaacctgca 83
||||||||||||||||||||||||
Sbjct: 66 agttcgttgtcgacgaaacctgca 89
>RF01926;mir-981;ABKP02011026.1/463-579 377271:Anopheles gambiae M
Length = 117
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 ttcgttgtcgacgaaacctgcac 84
|||||||||||||||||||||||
Sbjct: 74 ttcgttgtcgacgaaacctgcac 96
