miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00725;mir-iab-4;ABKP02025153.1/22654-22737 377271:Anopheles
gambiae M
Length = 84
Score = 125 bits (63), Expect = 1e-28
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 8 gcttcatgaacgtatactgaatgtatcctgagtgctatctatccggtataccttcagtat 67
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 gcttcatgaacgtatactgaatgtatcctgagtgctacttatccggtataccttcagtat 65
Query: 68 acgtaacaggaggcg 82
|||||||| ||||||
Sbjct: 66 acgtaacaagaggcg 80
>RF00725;mir-iab-4;AAJJ01001135.1/10616-10533 7070:Tribolium
castaneum (red flour beetle)
Length = 84
Score = 105 bits (53), Expect = 9e-23
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 17 acgtatactgaatgtatcctgagtgctatctatccggtataccttcagtatacgtaacag 76
||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 15 acgtatactgaatgtatcctgagtgttttctgtccggtataccttcagtatacgtaacag 74
Query: 77 gaggc 81
|||||
Sbjct: 75 gaggc 79
>RF00725;mir-iab-4;AAPU01010953.1/219687-219770 7230:Drosophila
mojavensis
Length = 84
Score = 89.7 bits (45), Expect = 5e-18
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 17 acgtatactgaatgtatcctgagtgctatc-tatccggtataccttcagtatacgtaaca 75
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 15 acgtatactgaatgtatcctgagtg-tatcctatccggtataccttcagtatacgtaaca 73
Query: 76 ggagg 80
||||
Sbjct: 74 cgagg 78
>RF00725;mir-iab-4;ABLF01001794.1/37283-37372 7029:Acyrthosiphon
pisum (pea aphid)
Length = 90
Score = 61.9 bits (31), Expect = 1e-09
Identities = 59/67 (88%), Gaps = 6/67 (8%)
Strand = Plus / Plus
Query: 17 acgtatactgaatgtatcctgagtgc--tat----ctatccggtataccttcagtatacg 70
||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 15 acgtatactaaatgtatcctgagtgcattataaaactgtccggtataccttcagtatacg 74
Query: 71 taacagg 77
|||||||
Sbjct: 75 taacagg 81
>RF00725;mir-iab-4;AADK01004318.1/3463-3550 7091:Bombyx mori
(domestic silkworm)
Length = 88
Score = 61.9 bits (31), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 4/64 (6%)
Strand = Plus / Plus
Query: 17 acgtatactgaatgtatcctgagtgc----tatctatccggtataccttcagtatacgta 72
|||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 15 acgtatactgaatgtatcctgagtgcgcgattcttgtccggtataccttcagtatacgta 74
Query: 73 acag 76
||||
Sbjct: 75 acag 78
>RF00725;mir-iab-4;ABJB010512107.1/48251-48167 6945:Ixodes
scapularis (black-legged tick)
Length = 85
Score = 60.0 bits (30), Expect = 5e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 18 cgtatactgaatgtatcctgagtgct-atctatccggtataccttcagtatacgtaac 74
|||||||||| ||||||||||||| | | | ||||||||||||||||||||||||||
Sbjct: 16 cgtatactgagtgtatcctgagtgtttaattttccggtataccttcagtatacgtaac 73
