miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00727;bantam;AAPU01011505.1/2277-2366 7230:Drosophila
          mojavensis
          Length = 90

 Score =  147 bits (74), Expect = 2e-35
 Identities = 81/82 (98%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactg-ttttttatacaagtgagatca 59
          |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttttatacaagtgagatca 60

                                
Query: 60 ttttgaaagctgattttgtcaa 81
          ||||||||||||||||||||||
Sbjct: 61 ttttgaaagctgattttgtcaa 82




>RF00727;bantam;AANI01017339.1/10975-11064 7244:Drosophila virilis
          Length = 90

 Score =  145 bits (73), Expect = 1e-34
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgttttttatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtatttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>RF00727;bantam;AAWU01005949.1/119500-119406 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 95

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 50 agtgagatcattttgaaagctgattttgt 78
          |||||||||||||||||||||||||||||
Sbjct: 54 agtgagatcattttgaaagctgattttgt 82




>RF00727;bantam;AAGE02003301.1/208408-208314 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 95

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 50 agtgagatcattttgaaagctgattttgt 78
          |||||||||||||||||||||||||||||
Sbjct: 55 agtgagatcattttgaaagctgattttgt 83




>RF00727;bantam;AAAB01008879.1/1730921-1731017 180454:Anopheles
          gambiae str. PEST
          Length = 97

 Score = 56.0 bits (28), Expect = 7e-08
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 47 acaagtgagatcattttgaaagctgattttgt 78
          ||||||||||||| ||||||||||||||||||
Sbjct: 53 acaagtgagatcactttgaaagctgattttgt 84




>RF00727;bantam;AAZO01005717.1/66950-67042 121224:Pediculus
          humanus corporis (human body louse)
          Length = 93

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 55 tgagatcattgtgaaagctgattttgt 81




>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
          vitripennis (jewel wasp)
          Length = 89

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78




>RF00727;bantam;AADG05005002.1/2155-2243 7460:Apis mellifera
          (honey bee)
          Length = 89

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78




>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
          castaneum (red flour beetle)
          Length = 89

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78




>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
          (black-legged tick)
          Length = 87

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 53 tgagatcattgtgaaagctgattttgt 79