miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;AAPU01010182.1/5430-5508 7230:Drosophila mojavensis
Length = 79
Score = 97.6 bits (49), Expect = 2e-20
Identities = 72/79 (91%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagatcc---tttctgataactctaatactgtc 63
|||||||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 1 atctgttcacatcttaccgggcagcattagattcctgttttaaataactctaatactgtc 60
Query: 64 aggtaaagatgtcgtccgt 82
|||||||||||||||||||
Sbjct: 61 aggtaaagatgtcgtccgt 79
>RF00241;mir-8;AAQB01006282.1/186530-186609 7260:Drosophila
willistoni
Length = 80
Score = 83.8 bits (42), Expect = 3e-16
Identities = 72/80 (90%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagatccttt-ct---gataactctaatactgt 62
|||||||||||||||||||||||||||||||| | | || |||| ||||||||||||
Sbjct: 1 atctgttcacatcttaccgggcagcattagattttgtactatagatatctctaatactgt 60
Query: 63 caggtaaagatgtcgtccgt 82
||||||||||||||||||||
Sbjct: 61 caggtaaagatgtcgtccgt 80
>RF00241;mir-8;AAAB01008986.1/3020387-3020310 180454:Anopheles
gambiae str. PEST
Length = 78
Score = 81.8 bits (41), Expect = 1e-15
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattag--atcctttctgataactctaatactgtcag 65
||||||||||||||||||||||||||||| || | || |||| ||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatatgttatcggatatttctaatactgtcag 61
Query: 66 gtaaagatgtcgtccg 81
||||||||||||||||
Sbjct: 62 gtaaagatgtcgtccg 77
>RF00241;mir-8;BAAB01175925.1/123-47 7091:Bombyx mori (domestic
silkworm)
Length = 77
Score = 65.9 bits (33), Expect = 8e-11
Identities = 66/73 (90%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 11 gttcacatcttaccgggcagcattaga-tcctttctgataact-ctaatactgtcaggta 68
|||| |||||||||||||||||||||| |||| ||| ||| | ||||||||||||||||
Sbjct: 5 gttcgcatcttaccgggcagcattagagtcctgtct-atattttctaatactgtcaggta 63
Query: 69 aagatgtcgtccg 81
|||||||||||||
Sbjct: 64 aagatgtcgtccg 76
>RF00241;mir-8;AAJJ01001355.1/29616-29540 7070:Tribolium castaneum
(red flour beetle)
Length = 77
Score = 65.9 bits (33), Expect = 8e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatcctttctgataactctaatactgtcaggta 68
||||| |||||||||||||||||||||||| | | ||| |||||||||||||||||
Sbjct: 3 ctgttaacatcttaccgggcagcattagattacattttatacttctaatactgtcaggta 62
Query: 69 aagatgtcgtccg 81
|||||||| ||||
Sbjct: 63 aagatgtcctccg 75
>RF00241;mir-8;AADG05004155.1/1299-1373 7460:Apis mellifera (honey
bee)
Length = 75
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagat 38
||||||||||||||||||||||||||||||||
Sbjct: 1 atctgttcacatcttaccgggcagcattagat 32
>RF00241;mir-8;AAZO01008551.1/16828-16905 121224:Pediculus humanus
corporis (human body louse)
Length = 78
Score = 58.0 bits (29), Expect = 2e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatcctttctga-taactctaatactgtcaggt 67
||||| |||||||||||||||||||||||| || | | ||| ||||||||||||||||
Sbjct: 3 ctgtttacatcttaccgggcagcattagattgattttaagtaattctaatactgtcaggt 62
Query: 68 aaagatgtc 76
|| ||||||
Sbjct: 63 aatgatgtc 71
>RF00241;mir-8;ABJB010621523.1/197-271 6945:Ixodes scapularis
(black-legged tick)
Length = 75
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 tctaatactgtcaggtaaagatgtc 76
|||||||||||||||||||||||||
Sbjct: 44 tctaatactgtcaggtaaagatgtc 68
