miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00751;mir-12;AADE01000788.1/13719-13792 46245:Drosophila
pseudoobscura pseudoobscura
Length = 74
Score = 123 bits (62), Expect = 3e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1 tacggctgagtattacatcaggtactggtgtgctttaaatccaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
|||||||||||||
Sbjct: 61 tatactacgccgtg 74
>RF00751;mir-12;AAPU01008564.1/43041-43114 7230:Drosophila
mojavensis
Length = 74
Score = 99.6 bits (50), Expect = 5e-21
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 tacggctgagtattacatcaggtactggtgtgcctttaatccaacaaccagtacttatgt 60
||||| |||||||||||||||||||||||||||| | | | ||||||||||||||||||
Sbjct: 1 tacggttgagtattacatcaggtactggtgtgccaattaactaacaaccagtacttatgt 60
Query: 61 catactacgccgtg 74
||||||||||||||
Sbjct: 61 catactacgccgtg 74
>RF00751;mir-12;AADG05008150.1/22506-22436 7460:Apis mellifera
(honey bee)
Length = 71
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggtgtg 32
||||||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggtgtg 32
>RF00751;mir-12;AAZX01000006.1/25515-25586 7425:Nasonia
vitripennis (jewel wasp)
Length = 72
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggtgt 31
|||||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggtgt 31
>RF00751;mir-12;ABJB010368806.1/9372-9305 6945:Ixodes scapularis
(black-legged tick)
Length = 68
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 ctgagtattacatcaggtactggt 29
||||||||||||||||||||||||
Sbjct: 6 ctgagtattacatcaggtactggt 29
>RF00751;mir-12;AAJJ01005828.1/1033-1102 7070:Tribolium castaneum
(red flour beetle)
Length = 70
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgagtattacatcaggtactggt 29
|||||||||||||||||||||||
Sbjct: 7 tgagtattacatcaggtactggt 29
