miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAGH01011800.1/12196-12109 7240:Drosophila
simulans
Length = 88
Score = 121 bits (61), Expect = 2e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 4 gttgttaaattggcaagatgtcggcatagctgacgttggaaaacgaattttgagagcgct 63
|||| ||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 4 gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgct 63
Query: 64 atgctgcatctagtcagttgttcaa 88
|||||||||||||||||||||||||
Sbjct: 64 atgctgcatctagtcagttgttcaa 88
>RF00661;mir-31;AANI01014909.1/166793-166706 7244:Drosophila
virilis
Length = 88
Score = 119 bits (60), Expect = 6e-27
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 tctgttgttaaattggcaagatgtcggcatagctgacgttggaaaacgaattttgagagc 60
||||||||| |||||||||||||||||||||||||||||| |||| || ||||| | |||
Sbjct: 1 tctgttgttcaattggcaagatgtcggcatagctgacgtttgaaagcgcatttttatagc 60
Query: 61 gctatgctgcatctagtcagttgttcaa 88
|||||||||||||||||||||| |||||
Sbjct: 61 gctatgctgcatctagtcagttattcaa 88
>RF00661;mir-31;AAPQ01007042.1/187291-187204 7220:Drosophila
erecta
Length = 88
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 4 gttgttaaattggcaagatgtcggcatagctgacgttggaaaacgaattttgagagcgct 63
|||| ||||||||||||||||||||||||||||||||| ||| || ||| ||||||||
Sbjct: 4 gttggtaaattggcaagatgtcggcatagctgacgttgaaaagcgcttttaaagagcgct 63
Query: 64 atgctgcatctagtcagttgttcaa 88
|||||||||||||||||||||||||
Sbjct: 64 atgctgcatctagtcagttgttcaa 88
>RF00661;mir-31;AAIZ01001980.1/15086-15173 7234:Drosophila
persimilis
Length = 88
Score = 111 bits (56), Expect = 2e-24
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 1 tctgttgttaaattggcaagatgtcggcatagctgacgttggaaaacgaattttgagagc 60
||||||| |||||||||||||||||||||||||||| |||| ||| ||| ||||||| |
Sbjct: 1 tctgttggtaaattggcaagatgtcggcatagctgaagttgaaaagcgatctttgagaac 60
Query: 61 gctatgctgcatctagtcagttgttcaa 88
|||||||||||||||||||||| |||||
Sbjct: 61 gctatgctgcatctagtcagttattcaa 88
>RF00661;mir-31;AAPU01010140.1/40129-40215 7230:Drosophila
mojavensis
Length = 87
Score = 79.8 bits (40), Expect = 6e-15
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 5 ttgttaaattggcaagatgtcggcatagctgacgttggaaaacgaattttgagagcgcta 64
||||| |||||||||||||||||||||||||||||| ||| || | || | |||||||
Sbjct: 5 ttgttgaattggcaagatgtcggcatagctgacgtttcaaagcgca-ttgcatagcgcta 63
Query: 65 tgctgcatctagtcagttgttcaa 88
|||||||||||||||||| |||||
Sbjct: 64 tgctgcatctagtcagttattcaa 87
>RF00661;mir-31;AAQB01006276.1/72264-72183 7260:Drosophila
willistoni
Length = 82
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 aattggcaagatgtcggcatagctga 36
||||||||||||||||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 agcgctatgctgcatctagtcagtt 82
|||||||||||||||||||||||||
Sbjct: 52 agcgctatgctgcatctagtcagtt 76
>RF00661;mir-31;AAZO01004538.1/561-481 121224:Pediculus humanus
corporis (human body louse)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAZX01004302.1/23296-23375 7425:Nasonia
vitripennis (jewel wasp)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AADG05006757.1/17977-18057 7460:Apis mellifera
(honey bee)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAJJ01000269.1/62248-62171 7070:Tribolium
castaneum (red flour beetle)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
