miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00854;mir-5;AASS01023484.1/3619-3686 7240:Drosophila simulans
Length = 68
Score = 101 bits (51), Expect = 1e-21
Identities = 61/63 (96%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgttgttccctaacatatcacagtgattttccttt 60
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgagttgttccc-aacatatcacagtgattttccttt 61
Query: 61 ata 63
|||
Sbjct: 62 ata 64
>RF00854;mir-5;AANI01014795.1/39532-39603 7244:Drosophila virilis
Length = 72
Score = 71.9 bits (36), Expect = 9e-13
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgttgtt---ccctaacatatcacagtgattttcc 57
||||||||||||||||||||||||||||| | || | ||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttcattaaccgttacatatcacagtgattttcc 62
Query: 58 tttata 63
||||||
Sbjct: 63 tttata 68
