miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;BT062831.1/323-237 4577:Zea mays
Length = 87
Score = 165 bits (83), Expect = 1e-40
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgcctatgtcctttgtttacaaaggatcaaaattgtggacctttgt 72
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctatgtcctttgtttacaaaggatcagaattgtggacctttgt 60
Query: 73 gttggttcgtaggcagtctccttggct 99
|||||||||||||||||||||||||||
Sbjct: 61 gttggttcgtaggcagtctccttggct 87
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 137 bits (69), Expect = 3e-32
Identities = 101/109 (92%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 2 ctgcctctgatagccaaggatgacttgcctatgtcctttgtttacaaaggatcaaaattg 61
|||||||||||||||||||||||||||||||||||||||| | |||||||||| || ||
Sbjct: 117 ctgcctctgatagccaaggatgacttgcctatgtcctttg-tcccaaaggatcagaa-tg 60
Query: 62 tggacctttgtgttggttcgtaggcagtctccttggctagcctgagtgg 110
|| ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 59 tgaacctttgagttggttcataggcagtctccttggctagcctgagtgg 11
>RF00645;MIR169_2;ABXC01005011.1/62641-62556 4558:Sorghum bicolor
(sorghum)
Length = 86
Score = 95.6 bits (48), Expect = 1e-19
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgcctatgtcctttgtttacaaaggatcaaaattgtggacctttgt 72
||||||||||||||||||||||||||||| | |||||||||| || |||| |||||||
Sbjct: 1 agccaaggatgacttgcctatgtcctttg-tcccaaaggatcagaa-tgtgaacctttga 58
Query: 73 gttggttcgtaggcagtctccttggcta 100
|||||||| |||||||||||||||||||
Sbjct: 59 gttggttcataggcagtctccttggcta 86
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 85.7 bits (43), Expect = 1e-16
Identities = 96/112 (85%), Gaps = 5/112 (4%)
Strand = Plus / Plus
Query: 3 tgcctctgatagccaaggatgacttgcctatgtcctttgtttacaaaggatcaaaattgt 62
||||||||||||||||||||||||||||| ||||||||| | | |||||||| || |||
Sbjct: 1 tgcctctgatagccaaggatgacttgcctgtgtcctttg-tgccgaaggatcagaaatgt 59
Query: 63 ggacctttg----tgttggttcgtaggcagtctccttggctagcctgagtgg 110
| |||||| | |||||| |||||||||||||||||||||||||||||
Sbjct: 60 gagcctttgagatagatggttcataggcagtctccttggctagcctgagtgg 111
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 6 ctctgatagccaaggatgacttgcctatgtcct 38
|||||||||||||||||||||||||| ||||||
Sbjct: 114 ctctgatagccaaggatgacttgcctgtgtcct 82
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 75 tggttcgtaggcagtctccttggctagcctgagtgg 110
|||||| | |||||||||||||||||||||||||||
Sbjct: 46 tggttcatgggcagtctccttggctagcctgagtgg 11
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 82 taggcagtctccttggctagcctgagtgg 110
|||||||||||||||||||||||||||||
Sbjct: 39 taggcagtctccttggctagcctgagtgg 11
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 cctgcctctgatagccaaggatgacttgcctat 33
|||||||||| ||||||||||||||||||||||
Sbjct: 136 cctgcctctggtagccaaggatgacttgcctat 104
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 6 ctctgatagccaaggatgacttgcctatgtcct 38
|||||||||||||||||||||||||| ||||||
Sbjct: 4 ctctgatagccaaggatgacttgcctgtgtcct 36
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 75 tggttcgtaggcagtctccttggctagcctgagtgg 110
|||||| | |||||||||||||||||||||||||||
Sbjct: 72 tggttcatgggcagtctccttggctagcctgagtgg 107
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 cctgcctctgatagccaaggatgacttgcctat 33
|||||||||| ||||||||||||||||||||||
Sbjct: 3 cctgcctctggtagccaaggatgacttgcctat 35
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 82 taggcagtctccttggctagcctgagtgg 110
|||||||||||||||||||||||||||||
Sbjct: 100 taggcagtctccttggctagcctgagtgg 128
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 9 tgatagccaaggatgacttgcctatgtcct 38
||||||||||||||||||||||||| ||||
Sbjct: 135 tgatagccaaggatgacttgcctatttcct 106
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 75 tggttcgtaggcagtctccttggctagcctgagt 108
|||||| |||||||||||||||||||| ||||||
Sbjct: 46 tggttcataggcagtctccttggctagtctgagt 13
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 ctctgatagccaaggatgacttgcctatgtcctt 39
||||| |||||||||||||||||||| |||||||
Sbjct: 114 ctctggtagccaaggatgacttgcctgtgtcctt 81
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 84 ggcagtctccttggctagcctgagtg 109
||||||||||||||||||||||||||
Sbjct: 37 ggcagtctccttggctagcctgagtg 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 6 ctctgatagccaaggatgacttgcctatgtcctt 39
||||| |||||||||||||||||||| |||||||
Sbjct: 127 ctctggtagccaaggatgacttgcctgtgtcctt 94
>RF00645;MIR169_2;AASG02006505.1/420-283 3988:Ricinus communis
(castor bean)
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgacttgcctatgtcct 38
||||||||||||||||||||||||| ||||
Sbjct: 10 tgatagccaaggatgacttgcctatttcct 39
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 6 ctctgatagccaaggatgacttgcctatgtcctt 39
||||| |||||||||||||||||||| |||||||
Sbjct: 8 ctctggtagccaaggatgacttgcctgtgtcctt 41
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 75 tggttcgtaggcagtctccttggctagcctgagt 108
|||||| |||||||||||||||||||| ||||||
Sbjct: 76 tggttcataggcagtctccttggctagtctgagt 109
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 6 ctctgatagccaaggatgacttgcctatgtcctt 39
||||| |||||||||||||||||||| |||||||
Sbjct: 3 ctctggtagccaaggatgacttgcctgtgtcctt 36
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 84 ggcagtctccttggctagcctgagtg 109
||||||||||||||||||||||||||
Sbjct: 93 ggcagtctccttggctagcctgagtg 118
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tctgatagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 135 tctgatagccaaggatgacttgcct 111
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 7 tctgatagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 149 tctgatagccaaggatgacttgcct 125
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 83 aggcagtctccttggctagcctgag 107
|||||||||||||||||||||||||
Sbjct: 38 aggcagtctccttggctagcctgag 14
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tctgatagccaaggatgacttgcctatgtc 36
|||| |||||||||||||||||||| ||||
Sbjct: 129 tctggtagccaaggatgacttgcctgtgtc 100
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctgatagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 8 tctgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctgatagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 8 tctgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa Japonica
Group
Length = 131
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 83 aggcagtctccttggctagcctgag 107
|||||||||||||||||||||||||
Sbjct: 100 aggcagtctccttggctagcctgag 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tctgatagccaaggatgacttgcctatgtc 36
|||| |||||||||||||||||||| ||||
Sbjct: 9 tctggtagccaaggatgacttgcctgtgtc 38
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 83 aggcagtctccttggctagcctga 106
||||||||||||||||||||||||
Sbjct: 38 aggcagtctccttggctagcctga 15
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tgatagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 142 tgatagccaaggatgacttgcct 120
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 tgatagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 139 tgatagccaaggatgacttgccta 116
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 7 tctgatagccaaggatgacttgcctatgtcct 38
|||| |||||||||||||||||||||| ||||
Sbjct: 112 tctggtagccaaggatgacttgcctatatcct 81
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 84 ggcagtctccttggctagcctga 106
|||||||||||||||||||||||
Sbjct: 37 ggcagtctccttggctagcctga 15
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 7 tctgatagccaaggatgacttgcctatgtcct 38
|||| |||||||||||||||||||||| ||||
Sbjct: 114 tctggtagccaaggatgacttgcctatatcct 83
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 84 ggcagtctccttggctagcctga 106
|||||||||||||||||||||||
Sbjct: 37 ggcagtctccttggctagcctga 15
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 cctgcctctgatagccaaggatgacttgccta 32
||||||| || |||||||||||||||||||||
Sbjct: 117 cctgcctttggtagccaaggatgacttgccta 86
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 cctgcctctgatagccaaggatgacttgccta 32
||||||| || |||||||||||||||||||||
Sbjct: 117 cctgcctttggtagccaaggatgacttgccta 86
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 aggcagtctccttggctagcctga 106
||||||||||||||||||||||||
Sbjct: 114 aggcagtctccttggctagcctga 137
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 10 tgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 10 tgatagccaaggatgacttgccta 33
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 7 tctgatagccaaggatgacttgcctatgtcct 38
|||| |||||||||||||||||||||| ||||
Sbjct: 4 tctggtagccaaggatgacttgcctatatcct 35
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 ggcagtctccttggctagcctga 106
|||||||||||||||||||||||
Sbjct: 81 ggcagtctccttggctagcctga 103
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 7 tctgatagccaaggatgacttgcctatgtcct 38
|||| |||||||||||||||||||||| ||||
Sbjct: 4 tctggtagccaaggatgacttgcctatatcct 35
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 ggcagtctccttggctagcctga 106
|||||||||||||||||||||||
Sbjct: 79 ggcagtctccttggctagcctga 101
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 cctgcctctgatagccaaggatgacttgccta 32
||||||| || |||||||||||||||||||||
Sbjct: 3 cctgcctttggtagccaaggatgacttgccta 34
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 cctgcctctgatagccaaggatgacttgccta 32
||||||| || |||||||||||||||||||||
Sbjct: 3 cctgcctttggtagccaaggatgacttgccta 34
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tagccaaggatgacttgcctatgtcct 38
|||||||||||||||||||||| ||||
Sbjct: 121 tagccaaggatgacttgcctatttcct 95
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tgatagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 148 tgatagccaaggatgacttgcct 126
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tgatagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 136 tgatagccaaggatgacttgcct 114
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 78 ttcgtaggcagtctccttggcta 100
|||||||||||||||||||||||
Sbjct: 43 ttcgtaggcagtctccttggcta 21
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcctatgtcct 38
|||||||||||||||||||||| ||||
Sbjct: 16 tagccaaggatgacttgcctatttcct 42
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus
trichocarpa
Length = 151
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 10 tgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 10 tgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 ttcgtaggcagtctccttggcta 100
|||||||||||||||||||||||
Sbjct: 102 ttcgtaggcagtctccttggcta 124
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gatagccaaggatgacttgcct 31
||||||||||||||||||||||
Sbjct: 134 gatagccaaggatgacttgcct 113
>RF00865;MIR169_5;AASG02003941.1/7647-7771 3988:Ricinus communis
(castor bean)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 tgatagccaaggatgacttgcc 30
||||||||||||||||||||||
Sbjct: 109 tgatagccaaggatgacttgcc 88
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tctgatagccaaggatgacttgccta 32
|||| |||||||||||||||||||||
Sbjct: 126 tctggtagccaaggatgacttgccta 101
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 ctctgatagccaaggatgacttgcct 31
||||| ||||||||||||||||||||
Sbjct: 119 ctctggtagccaaggatgacttgcct 94
>RF00865;MIR169_5;BT061088.1/1092-1244 4577:Zea mays
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gatagccaaggatgacttgcct 31
||||||||||||||||||||||
Sbjct: 136 gatagccaaggatgacttgcct 115
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 83 aggcagtctccttggctagcct 104
||||||||||||||||||||||
Sbjct: 38 aggcagtctccttggctagcct 17
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 ctctgatagccaaggatgacttgcct 31
||||| ||||||||||||||||||||
Sbjct: 134 ctctggtagccaaggatgacttgcct 109
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gatagccaaggatgacttgcct 31
||||||||||||||||||||||
Sbjct: 135 gatagccaaggatgacttgcct 114
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 gatagccaaggatgacttgcct 31
||||||||||||||||||||||
Sbjct: 157 gatagccaaggatgacttgcct 136
>RF00645;MIR169_2;ABIM01022203.1/1632-1495 3649:Carica papaya
(papaya)
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gatagccaaggatgacttgcct 31
||||||||||||||||||||||
Sbjct: 11 gatagccaaggatgacttgcct 32
>RF00645;MIR169_2;AASG02003941.1/7763-7653 3988:Ricinus communis
(castor bean)
Length = 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgatagccaaggatgacttgcc 30
||||||||||||||||||||||
Sbjct: 9 tgatagccaaggatgacttgcc 30
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tctgatagccaaggatgacttgccta 32
|||| |||||||||||||||||||||
Sbjct: 8 tctggtagccaaggatgacttgccta 33
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 ctctgatagccaaggatgacttgcct 31
||||| ||||||||||||||||||||
Sbjct: 8 ctctggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gatagccaaggatgacttgcct 31
||||||||||||||||||||||
Sbjct: 11 gatagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 ctctgatagccaaggatgacttgcct 31
||||| ||||||||||||||||||||
Sbjct: 10 ctctggtagccaaggatgacttgcct 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 aggcagtctccttggctagcct 104
||||||||||||||||||||||
Sbjct: 106 aggcagtctccttggctagcct 127
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gatagccaaggatgacttgcct 31
||||||||||||||||||||||
Sbjct: 11 gatagccaaggatgacttgcct 32
