miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 264 bits (133), Expect = 4e-70
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 32 cgatgagagcactgctctggtagccaaggatgacttgcctgtggcctccatcagtcgcag 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cgatgagagcactgctctggtagccaaggatgacttgcctgtggcctccatcagtcgcag 74
Query: 92 aggacgctgttcttctgcttgtggttgtcgatcgcaggcagtctccttggctagcccgag 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aggacgctgttcttctgcttgtggttgtcgatcgcaggcagtctccttggctagcccgag 14
Query: 152 cggctctcatcca 164
|||||||||||||
Sbjct: 13 cggctctcatcca 1
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 238 bits (120), Expect = 2e-62
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 39 agcactgctctggtagccaaggatgacttgcctgtggcctccatcagtcgcagaggacgc 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcactgctctggtagccaaggatgacttgcctgtggcctccatcagtcgcagaggacgc 60
Query: 99 tgttcttctgcttgtggttgtcgatcgcaggcagtctccttggctagcccgagcggctct 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttcttctgcttgtggttgtcgatcgcaggcagtctccttggctagcccgagcggctct 120
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 32 cgatgagagcactgctctggtagccaaggatgacttgcctgtggcctcca 81
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cgatgagagcactgctctggtagccaaggatgacttgcctgtggcctcca 99
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 37 agagcactgctctggtagccaaggatgacttgcctgtggcctcca 81
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagcactgctctggtagccaaggatgacttgcctgtggcctcca 45
Score = 83.8 bits (42), Expect = 8e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 111 tgtggttgtcgatcgcaggcagtctccttggctagcccgagcggctctca 160
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 90 tgtggttgtcgatcgcaggcagtctccttggctagcctcagcggctctca 139
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 126 caggcagtctccttggctagcccgagcggctctcatcc 163
|||||||||||||||||||||| |||||||||||||||
Sbjct: 39 caggcagtctccttggctagcctgagcggctctcatcc 2
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 47 tctggtagccaaggatgacttgcctgtg 74
||||||||||||||||||||||||||||
Sbjct: 129 tctggtagccaaggatgacttgcctgtg 102
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 45 gctctggtagccaaggatgacttgcctgtg 74
||||||||||||||||||||||||||||||
Sbjct: 115 gctctggtagccaaggatgacttgcctgtg 86
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 45 gctctggtagccaaggatgacttgcctgtg 74
||||||||||||||||||||||||||||||
Sbjct: 128 gctctggtagccaaggatgacttgcctgtg 99
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 45 gctctggtagccaaggatgacttgcctgtg 74
||||||||||||||||||||||||||||||
Sbjct: 7 gctctggtagccaaggatgacttgcctgtg 36
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 45 gctctggtagccaaggatgacttgcctgtg 74
||||||||||||||||||||||||||||||
Sbjct: 2 gctctggtagccaaggatgacttgcctgtg 31
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa Japonica
Group
Length = 131
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 126 caggcagtctccttggctagcccgagcggctct 158
|||||||||||||||||||||| ||||||||||
Sbjct: 99 caggcagtctccttggctagcctgagcggctct 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcctgtg 74
||||||||||||||||||||||||||||
Sbjct: 9 tctggtagccaaggatgacttgcctgtg 36
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 119 tcgatcgcaggcagtctccttggctagcccgagcggctct 158
|||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 46 tcgatcacaggcagtctccttggctagtccgggcggctct 7
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 52 tagccaaggatgacttgcctgtggcctc 79
||||||||||||||||||||||||||||
Sbjct: 133 tagccaaggatgacttgcctgtggcctc 106
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 52 tagccaaggatgacttgcctgtggcctc 79
||||||||||||||||||||||||||||
Sbjct: 155 tagccaaggatgacttgcctgtggcctc 128
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 126 caggcagtctccttggctagcccgagcggctctcatcc 163
|||||||||||||||||||| | | |||||||| ||||
Sbjct: 39 caggcagtctccttggctagtctgggcggctcttatcc 2
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgtggcctcc 80
||||||||||||||||||||||||| ||||||
Sbjct: 10 tggtagccaaggatgacttgcctgtagcctcc 41
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 tagccaaggatgacttgcctgtggcctc 79
||||||||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctgtggcctc 40
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 119 tcgatcgcaggcagtctccttggctagcccgagcggctct 158
|||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 100 tcgatcacaggcagtctccttggctagtccgggcggctct 139
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 52 tagccaaggatgacttgcctgtggcctc 79
||||||||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctgtggcctc 40
>RF00865;MIR169_5;ABXC01001464.1/182397-182247 4558:Sorghum bicolor
(sorghum)
Length = 151
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 43 ctgctctggtagccaaggatgacttgcctgtggcctcca 81
||||| |||||||||||||||| |||||||||||||||
Sbjct: 140 ctgctttggtagccaaggatgagctgcctgtggcctcca 102
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 46 ctctggtagccaaggatgacttgcctgtggcctcc 80
||||| ||||||||||||||||||||||| |||||
Sbjct: 114 ctctgatagccaaggatgacttgcctgtgtcctcc 80
>RF00645;MIR169_2;ABXC01001464.1/182253-182392 4558:Sorghum
bicolor (sorghum)
Length = 140
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 43 ctgctctggtagccaaggatgacttgcctgtggcctcca 81
||||| |||||||||||||||| |||||||||||||||
Sbjct: 6 ctgctttggtagccaaggatgagctgcctgtggcctcca 44
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 46 ctctggtagccaaggatgacttgcctgtggcctcc 80
||||| ||||||||||||||||||||||| |||||
Sbjct: 4 ctctgatagccaaggatgacttgcctgtgtcctcc 38
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 48 ctggtagccaaggatgacttgcctgt 73
||||||||||||||||||||||||||
Sbjct: 141 ctggtagccaaggatgacttgcctgt 116
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 126 caggcagtctccttggctagcccg 149
||||||||||||||||||||||||
Sbjct: 39 caggcagtctccttggctagcccg 16
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 46 ctctggtagccaaggatgacttgcct 71
||||||||||||||||||||||||||
Sbjct: 131 ctctggtagccaaggatgacttgcct 106
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 127 aggcagtctccttggctagcccgagcggctct 158
||||||||||||||||||||| ||| ||||||
Sbjct: 38 aggcagtctccttggctagcctgagtggctct 7
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||
Sbjct: 9 tctggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 ctctggtagccaaggatgacttgcct 71
||||||||||||||||||||||||||
Sbjct: 8 ctctggtagccaaggatgacttgcct 33
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 127 aggcagtctccttggctagcccgagcggctct 158
||||||||||||||||||||| ||| ||||||
Sbjct: 101 aggcagtctccttggctagcctgagtggctct 132
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 48 ctggtagccaaggatgacttgcctgt 73
||||||||||||||||||||||||||
Sbjct: 9 ctggtagccaaggatgacttgcctgt 34
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 126 caggcagtctccttggctagcccg 149
||||||||||||||||||||||||
Sbjct: 111 caggcagtctccttggctagcccg 134
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 151 tggtagccaaggatgacttgcctgt 127
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 47 tctggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 126 tctggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;BT061088.1/1092-1244 4577:Zea mays
Length = 153
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 52 tagccaaggatgacttgcctgtggc 76
|||||||||||||||||||||||||
Sbjct: 134 tagccaaggatgacttgcctgtggc 110
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 119 tcgatcgcaggcagtctccttggctagcccgagcgg 154
|||||| |||||||||||||||||||| ||| ||||
Sbjct: 48 tcgatcacaggcagtctccttggctagtccgggcgg 13
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 47 tctggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 112 tctggtagccaaggatgacttgcct 88
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 47 tctggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 114 tctggtagccaaggatgacttgcct 90
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctgt 33
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 8 tctggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 4 tctggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 46 ctctggtagccaaggatgacttgcctgtg 74
||||| |||||||||||||||||||||||
Sbjct: 4 ctctgatagccaaggatgacttgcctgtg 32
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 4 tctggtagccaaggatgacttgcct 28
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 119 tggtagccaaggatgacttgcctg 96
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcctg 94
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcctg 104
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 142 tggtagccaaggatgacttgcctg 119
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 47 tctggtagccaaggatgacttgcc 70
||||||||||||||||||||||||
Sbjct: 112 tctggtagccaaggatgacttgcc 89
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 135 tggtagccaaggatgacttgcctg 112
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 115 tggtagccaaggatgacttgcctg 92
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana
(thale cress)
Length = 152
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcc 70
||||||||||||||||||||||||
Sbjct: 11 tctggtagccaaggatgacttgcc 34
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;BT061088.1/1224-1114 4577:Zea mays
Length = 111
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgcctgtggc 76
||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctgtggc 24
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 119 tcgatcgcaggcagtctccttggcta 144
|||||| |||||||||||||||||||
Sbjct: 86 tcgatcacaggcagtctccttggcta 111
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;BT054579.1/279-412 4577:Zea mays
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 50 ggtagccaaggatgacttgcctgtggcctcc 80
||||||||||||||| ||||||||||||||
Sbjct: 116 ggtagccaaggatgagctgcctgtggcctcc 86
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 109 tggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 109 tggtagccaaggatgacttgcct 87
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 52 tagccaaggatgacttgcctgtggcc 77
||||||||||||||||||||| ||||
Sbjct: 132 tagccaaggatgacttgcctgaggcc 107
>RF00865;MIR169_5;AB016889.1/45011-45196 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 51 gtagccaaggatgacttgcctg 72
||||||||||||||||||||||
Sbjct: 168 gtagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 51 gtagccaaggatgacttgcctg 72
||||||||||||||||||||||
Sbjct: 167 gtagccaaggatgacttgcctg 146
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcc 70
||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 126 caggcagtctccttggctagcc 147
||||||||||||||||||||||
Sbjct: 39 caggcagtctccttggctagcc 18
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcc 70
||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcc 70
||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 47 tctggtagccaaggatgacttgcctg 72
|||| |||||||||||||||||||||
Sbjct: 135 tctgatagccaaggatgacttgcctg 110
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcc 70
||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 47 tctggtagccaaggatgacttgcctg 72
|||| |||||||||||||||||||||
Sbjct: 149 tctgatagccaaggatgacttgcctg 124
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 46 ctctggtagccaaggatgacttgcct 71
||||| ||||||||||||||||||||
Sbjct: 113 ctctgatagccaaggatgacttgcct 88
>RF00865;MIR169_5;AP008208.1/18658095-18658282 39947:Oryza sativa
Japonica Group
Length = 188
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 50 ggtagccaaggatgacttgcct 71
||||||||||||||||||||||
Sbjct: 172 ggtagccaaggatgacttgcct 151
>RF00645;MIR169_2;ABIM01022203.1/1632-1495 3649:Carica papaya
(papaya)
Length = 138
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 tagccaaggatgacttgcctgtggcc 77
||||||||||||||||||||| ||||
Sbjct: 13 tagccaaggatgacttgcctgaggcc 38
>RF00645;MIR169_2;AY551201.1/49-220 3702:Arabidopsis thaliana
(thale cress)
Length = 172
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 gtagccaaggatgacttgcctg 72
||||||||||||||||||||||
Sbjct: 12 gtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AB016889.1/45191-45017 3702:Arabidopsis thaliana
(thale cress)
Length = 175
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 gtagccaaggatgacttgcctg 72
||||||||||||||||||||||
Sbjct: 14 gtagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcc 70
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 126 caggcagtctccttggctagcc 147
||||||||||||||||||||||
Sbjct: 113 caggcagtctccttggctagcc 134
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcc 70
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcc 70
||||||||||||||||||||||
Sbjct: 12 tggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcctg 72
|||| |||||||||||||||||||||
Sbjct: 8 tctgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 47 tctggtagccaaggatgacttgcctg 72
|||| |||||||||||||||||||||
Sbjct: 8 tctgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AP004062.3/84631-84457 39947:Oryza sativa
Japonica Group
Length = 175
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 ggtagccaaggatgacttgcct 71
||||||||||||||||||||||
Sbjct: 10 ggtagccaaggatgacttgcct 31
