miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00724;mir-282;AAPT01020493.1/70677-70773 7222:Drosophila
grimshawi
Length = 97
Score = 186 bits (94), Expect = 3e-47
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 63
Query: 61 atagcctatgagaggttaggtgtacaaatggatc 94
||||||||||||||||||||||||||||||||||
Sbjct: 64 atagcctatgagaggttaggtgtacaaatggatc 97
>RF00724;mir-282;AAPU01011488.1/130621-130527 7230:Drosophila
mojavensis
Length = 95
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/84 (90%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 60
|||||||||||||||||||||||||||||||||||||||| ||| || |||||||
Sbjct: 4 ttccttataaatctagcctctactaggctttgtctgtgca--tttgatataagatcagac 61
Query: 61 atagcctatgagaggttaggtgta 84
||||||||||||||||||||||||
Sbjct: 62 atagcctatgagaggttaggtgta 85
>RF00724;mir-282;AAQB01009652.1/11236-11325 7260:Drosophila
willistoni
Length = 90
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/84 (89%), Gaps = 7/84 (8%)
Strand = Plus / Plus
Query: 2 tccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagaca 61
||||||||||||||||||||||||||||||||||||||| ||| || |||||||
Sbjct: 5 tccttataaatctagcctctactaggctttgtctgtgca---tttggat----tcagaca 57
Query: 62 tagcctatgagaggttaggtgtac 85
||||||||||||||||||||||||
Sbjct: 58 tagcctatgagaggttaggtgtac 81
>RF00724;mir-282;AE014296.4/3251022-3251116 7227:Drosophila
melanogaster (fruit fly)
Length = 95
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 60
|||||| ||||||||||||||||||||||||||||||||| || || | |||||||
Sbjct: 4 ttccttctaaatctagcctctactaggctttgtctgtgca--ttcgaaagccgatcagac 61
Query: 61 atagcctatgagaggttaggtgtac 85
||||||||| |||||||||||||||
Sbjct: 62 atagcctataagaggttaggtgtac 86
>RF00724;mir-282;AAGE02015805.1/19430-19533 7159:Aedes aegypti
(yellow fever mosquito)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 aatctagcctctactaggctttgtctgt 37
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctcctaggctttgtctgt 40
>RF00724;mir-282;ABKP02026817.1/6213-6306 377271:Anopheles gambiae
M
Length = 94
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 aatctagcctctactaggctttgtctgt 37
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctcttctaggctttgtctgt 40
