miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00789;mir-286;AAPT01006453.1/2821-2925 7222:Drosophila grimshawi
Length = 105
Score = 206 bits (104), Expect = 4e-53
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatatacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatatacaata 60
Query: 61 tatataaagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatataaagtgactagaccgaacactcgtgctataattttaaaa 104
>RF00789;mir-286;AAPU01010225.1/183664-183561 7230:Drosophila
mojavensis
Length = 104
Score = 99.6 bits (50), Expect = 7e-21
Identities = 93/105 (88%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttg-aacctaaactctatatacaat 59
||||||||||||||||||||||||||||||| ||||| ||| || || | | | || |
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttcaacatatacaccaaa--catt 58
Query: 60 atatataaagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 ctatataaagtgactagaccgaacactcgtgctataattttaaaa 103
>RF00789;mir-286;AANI01014795.1/39192-39293 7244:Drosophila virilis
Length = 102
Score = 95.6 bits (48), Expect = 1e-19
Identities = 92/105 (87%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatat-acaat 59
||||||||||||||||||||||||||||||||||||| | ||| |||| | ||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttca----aacaatataccattat 56
Query: 60 atatataaagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ctatataaagtgactagaccgaacactcgtgctataattttaaaa 101
>RF00789;mir-286;AAQB01006291.1/71587-71475 7260:Drosophila
willistoni
Length = 113
Score = 77.8 bits (39), Expect = 3e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 66 aaagtgactagaccgaacactcgtgctataattttaaaa 104
|||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aaagtgactagaccgaacactcgtgctataattttaaaa 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||||||||||||| ||| |||||
Sbjct: 1 ttaaaattgaatggcgattgtcggtatagtctctttt 37
>RF00789;mir-286;AAPP01018770.1/56774-56877 7217:Drosophila
ananassae
Length = 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttt 37
>RF00789;mir-286;AAPQ01007044.1/1205305-1205207 7220:Drosophila
erecta
Length = 99
Score = 75.8 bits (38), Expect = 1e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
>RF00789;mir-286;AAFS01000371.1/25325-25421 46245:Drosophila
pseudoobscura pseudoobscura
Length = 97
Score = 69.9 bits (35), Expect = 6e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataatttta 101
|||||||||||||||||||||||||||||||||||
Sbjct: 59 aagtgactagaccgaacactcgtgctataatttta 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttt 37
>RF00789;mir-286;ABKP02021621.1/18938-19014 377271:Anopheles
gambiae M
Length = 77
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 aaagtgactagaccgaacactcgt 89
||||||||||||||||||||||||
Sbjct: 44 aaagtgactagaccgaacactcgt 67
>RF00789;mir-286;AAWU01006018.1/401-308 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 agtgactagaccgaacactcgt 89
||||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcgt 80
>RF00789;mir-286;AAWU01011011.1/917-844 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcg 88
||||||||||||||||||||||
Sbjct: 42 aagtgactagaccgaacactcg 63
>RF00789;mir-286;AAGE02008291.1/17656-17755 7159:Aedes aegypti
(yellow fever mosquito)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 agtgactagaccgaacactcgt 89
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
