miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00853;mir-304;AAPU01008564.1/42415-42503 7230:Drosophila
mojavensis
Length = 89
Score = 137 bits (69), Expect = 3e-32
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 gcagcattgaataatctcaatttgtaaatgtgagcgattattaagaatttgacgcactca 60
|||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1 gcagcattgattaatctcaatttgtaaatgtgagcgatttttaactatttgacgcactca 60
Query: 61 ctttgcaattggagattgctcgaga 85
|||||||||||||||||||||||||
Sbjct: 61 ctttgcaattggagattgctcgaga 85
>RF00853;mir-304;AAFS01000251.1/56138-56051 46245:Drosophila
pseudoobscura pseudoobscura
Length = 88
Score = 109 bits (55), Expect = 6e-24
Identities = 77/83 (92%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 gcagcattgaataatctcaatttgtaaatgtgagcgattattaagaatttgacgcactca 60
||||||||||||||||||||||||||||||||||||||| | | | ||||||| ||||||
Sbjct: 1 gcagcattgaataatctcaatttgtaaatgtgagcgatt-tgaggcatttgacacactca 59
Query: 61 ctttgcaattggagattgctcga 83
|||||||| ||||||||||||||
Sbjct: 60 ctttgcaactggagattgctcga 82
>RF00853;mir-304;AAQB01006319.1/7240-7152 7260:Drosophila
willistoni
Length = 89
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 5 cattgaataatctcaatttgtaaatgtgagcgattattaagaatttgacgcactcacttt 64
|||||| |||||||||||||||||||||||||||| | ||| || |||||||||||
Sbjct: 5 cattgattaatctcaatttgtaaatgtgagcgatttaaatccattcgatgcactcacttt 64
Query: 65 gcaattggagattgctcgagattgc 89
|||||||||||||||||||||||||
Sbjct: 65 gcaattggagattgctcgagattgc 89
