miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00716;mir-3;AAPT01020768.1/62694-62618 7222:Drosophila
grimshawi
Length = 77
Score = 151 bits (76), Expect = 1e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 attatatggcaaaccttgttcagttttgacaactttgtttctgtgcatcatcactgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attatatggcaaaccttgttcagttttgacaactttgtttctgtgcatcatcactgggtg 61
Query: 61 aagtttgtcgtataat 76
||||||||||||||||
Sbjct: 62 aagtttgtcgtataat 77
>RF00716;mir-3;AANI01014795.1/38873-38947 7244:Drosophila virilis
Length = 75
Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 49 catcactgggtgaagtttgtcgtataat 76
||||||||||||||||||||||||||||
Sbjct: 48 catcactgggtgaagtttgtcgtataat 75
>RF00716;mir-3;AAPU01010225.1/183969-183894 7230:Drosophila
mojavensis
Length = 76
Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 49 catcactgggtgaagtttgtcgtataat 76
||||||||||||||||||||||||||||
Sbjct: 49 catcactgggtgaagtttgtcgtataat 76
>RF00716;mir-3;AAQB01006291.1/71887-71803 7260:Drosophila
willistoni
Length = 85
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 catcactgggtgaagtttgtcgtataat 76
||||||||||||||||||||| ||||||
Sbjct: 58 catcactgggtgaagtttgtcttataat 85
>RF00716;mir-3;AAFS01000371.1/25053-25121 46245:Drosophila
pseudoobscura pseudoobscura
Length = 69
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 cactgggtgaagtttgtcgtataat 76
|||||||||||||||||| ||||||
Sbjct: 45 cactgggtgaagtttgtcttataat 69
