miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00807;mir-314;AAPT01020574.1/773332-773257 7222:Drosophila
grimshawi
Length = 76
Score = 151 bits (76), Expect = 1e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctggctaaggaaagttggatttcctaggtattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctggctaaggaaagttggatttcctaggtattc 60
Query: 61 gagccaataagttcgg 76
||||||||||||||||
Sbjct: 61 gagccaataagttcgg 76
>RF00807;mir-314;AAPP01019289.1/431088-431175 7217:Drosophila
ananassae
Length = 88
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 ggtattcgagccaataagttcgg 76
|||||||||||||||||||||||
Sbjct: 66 ggtattcgagccaataagttcgg 88
>RF00807;mir-314;AAFS01000446.1/64778-64866 46245:Drosophila
pseudoobscura pseudoobscura
Length = 89
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 ggtattcgagccaataagttcgg 76
|||||||||||||||||||||||
Sbjct: 67 ggtattcgagccaataagttcgg 89
>RF00807;mir-314;AAPU01011627.1/156896-156990 7230:Drosophila
mojavensis
Length = 95
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 ggtattcgagccaataagttcgg 76
|||||||||||||||||||||||
Sbjct: 73 ggtattcgagccaataagttcgg 95
>RF00807;mir-314;AANI01017486.1/342740-342830 7244:Drosophila
virilis
Length = 91
Score = 46.1 bits (23), Expect = 6e-05
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctgg 31
|||||||||||||||||| ||||||||||||
Sbjct: 1 tcgtaacttgtgtggctt-gaatgtacctgg 30
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 ggtattcgagccaataagttcgg 76
|||||||||||||||||||||||
Sbjct: 69 ggtattcgagccaataagttcgg 91
