miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00818;mir-318;AAPU01010980.1/46750-46818 7230:Drosophila
mojavensis
Length = 69
Score = 129 bits (65), Expect = 5e-30
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcagatgtccaagcatcactgggctttgttta 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttatgggatacactaagttcagttttgtcagatgtccaagcatcactgggctttgttta 60
Query: 61 tctcataag 69
|||||||||
Sbjct: 61 tctcataag 69
>RF00818;mir-318;AAQB01008948.1/667-736 7260:Drosophila willistoni
Length = 70
Score = 85.7 bits (43), Expect = 6e-17
Identities = 65/70 (92%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcagatgtcca--agcatcactgggctttgtt 58
|||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 1 tttatgggatacaccaagttcagttttgtcgcat-tccacgagcatcactgggctttgtt 59
Query: 59 tatctcataa 68
||||||||||
Sbjct: 60 tatctcataa 69
>RF00818;mir-318;AAGH01004927.1/3240-3173 7240:Drosophila simulans
Length = 68
Score = 67.9 bits (34), Expect = 1e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 tttatgggatacaccaagttcagttttgtcagatgtccaagcatcactgggctttgttta 60
|||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 1 tttatgggatacacacagttcagttttgtcacacttt-aagcatcactgggctttgttta 59
Query: 61 tctcat 66
||||||
Sbjct: 60 tctcat 65
>RF00818;mir-318;AAPP01019505.1/87887-87819 7217:Drosophila
ananassae
Length = 69
Score = 60.0 bits (30), Expect = 4e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 40 agcatcactgggctttgtttatctcataag 69
||||||||||||||||||||||||||||||
Sbjct: 40 agcatcactgggctttgtttatctcataag 69
