miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00854;mir-5;AASS01023484.1/3619-3686 7240:Drosophila simulans
Length = 68
Score = 105 bits (53), Expect = 7e-23
Identities = 63/65 (96%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 gctaaaaggaacgatcgttgtgatatgagttgtttcctaacatatcacagtgattttcct 60
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1 gctaaaaggaacgatcgttgtgatatgagttg-ttcccaacatatcacagtgattttcct 59
Query: 61 ttata 65
|||||
Sbjct: 60 ttata 64
>RF00854;mir-5;AANI01014795.1/39532-39603 7244:Drosophila virilis
Length = 72
Score = 65.9 bits (33), Expect = 6e-11
Identities = 59/67 (88%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 2 ctaaaaggaacgatcgttgtgatatgagttgttt---cctaacatatcacagtgattttc 58
|||||||||||||||||||||||||| ||| || | | |||||||||||||||||||
Sbjct: 2 ctaaaaggaacgatcgttgtgatatgcgttcattaaccgttacatatcacagtgattttc 61
Query: 59 ctttata 65
|||||||
Sbjct: 62 ctttata 68
