miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00695;MIR398;EU940707.1/90-217 4577:Zea mays
Length = 128
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 124 tgcatgtgttctcaggtcgcccccgcaaggccttc 158
||||||||||||||||||||||||| | |||||||
Sbjct: 94 tgcatgtgttctcaggtcgcccccggagggccttc 128
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 gcagttccggcgggggcgaactgagaacacat 42
|||||||||||||||||| |||| ||||||||
Sbjct: 1 gcagttccggcgggggcggactgggaacacat 32
>RF00695;MIR398;ABXC01000980.1/272433-272305 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 124 tgcatgtgttctcaggtcgcccccgcaaggccttc 158
|||||||||||||||||||||||||| |||||||
Sbjct: 95 tgcatgtgttctcaggtcgcccccgcggggccttc 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 cagttccggcgggggcgaactgagaacacat 42
||||||||||||||||| |||| ||||||||
Sbjct: 2 cagttccggcgggggcggactgggaacacat 32
