miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;AASR01013769.1/615-715 7240:Drosophila simulans
Length = 101
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 caatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 caatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgct 66
Query: 61 tgagaatacacgtagttcaccgagatttgtt 91
|||||||||||||||||||||||||||||||
Sbjct: 67 tgagaatacacgtagttcaccgagatttgtt 97
>RF00694;mir-137;AAPP01018794.1/261725-261826 7217:Drosophila
ananassae
Length = 102
Score = 133 bits (67), Expect = 4e-31
Identities = 86/91 (94%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 2 aatctccaatggccacgtgtatgctcgtagctataacctgaaat-ccaaatgttattgct 60
||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||
Sbjct: 8 aatctccaatggccacgtgtatgctcgtagctataacgtgaaatgcgaaatgttattgct 67
Query: 61 tgagaatacacgtagttcaccgagatttgtt 91
||||||||||||||||||| ||||||||||
Sbjct: 68 tgagaatacacgtagttcagagagatttgtt 98
>RF00694;mir-137;AAFS01000057.1/187400-187500 46245:Drosophila
pseudoobscura pseudoobscura
Length = 101
Score = 103 bits (52), Expect = 4e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 2 aatctccaatggccacgtgtatgctcgtagctataacctgaaatccaaatgttattgctt 61
||||| ||| |||||||||||| ||| |||||||||||||| |||| |||||||||||||
Sbjct: 8 aatcttcaacggccacgtgtatactcatagctataacctgatatccgaatgttattgctt 67
Query: 62 gagaatacacgtagtt 77
||||||||||||||||
Sbjct: 68 gagaatacacgtagtt 83
>RF00694;mir-137;AANI01011213.1/2061-1961 7244:Drosophila virilis
Length = 101
Score = 99.6 bits (50), Expect = 6e-21
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 9 aatggccacgtgtatgctcgtagctataacctg-aaatccaaatgttattgcttgagaat 67
||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 15 aatggccacgtgtatgctcgtagctataacctgtacaatcaaatgttattgcttgagaat 74
Query: 68 acacgtagtt 77
||||||||||
Sbjct: 75 acacgtagtt 84
>RF00694;mir-137;AAPU01010131.1/289658-289758 7230:Drosophila
mojavensis
Length = 101
Score = 85.7 bits (43), Expect = 9e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 caatggccacgtgtatgctcgtagctataacctg-aaatccaaatgttattgcttgagaa 66
||||||||||||||||||||||||||||||| | | | ||||||||||||||||||||
Sbjct: 14 caatggccacgtgtatgctcgtagctataactggtacaatcaaatgttattgcttgagaa 73
Query: 67 tacacgtagtt 77
|||||||||||
Sbjct: 74 tacacgtagtt 84
>RF00694;mir-137;AAQB01009904.1/3815-3716 7260:Drosophila
willistoni
Length = 100
Score = 67.9 bits (34), Expect = 2e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 9 aatggccacgtgtatgctcgtagctataacctgaaatccaaa-tgttattgcttgagaat 67
||||||||||||||| || ||||| ||||||| || |||| |||||||||||||||||
Sbjct: 15 aatggccacgtgtattcttatagctgtaacctgttatacaaaatgttattgcttgagaat 74
Query: 68 acacgtagtt 77
||||||||||
Sbjct: 75 acacgtagtt 84
>RF00694;mir-137;AAGJ02120953.1/3113-3013 7668:Strongylocentrotus
purpuratus
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtagt 76
|||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtagt 83
>RF00694;mir-137;ABLF01001266.1/4970-5069 7029:Acyrthosiphon pisum
(pea aphid)
Length = 100
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgtagtt 77
|||||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagtt 83
>RF00694;mir-137;AADG05005118.1/28931-28831 7460:Apis mellifera
(honey bee)
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgtagtt 77
|||||||||||||||||||||||||||
Sbjct: 57 tgttattgcttgagaatacacgtagtt 83
>RF00694;mir-137;AAGE02029705.1/92443-92543 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgtagtt 77
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;ABKQ02013341.1/3039-2937 377270:Anopheles gambiae
S
Length = 103
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgtagtt 77
|||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagtt 84
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgtagt 76
||||||||||||||||||||||||||
Sbjct: 56 tgttattgcttgagaatacacgtagt 81
>RF00694;mir-137;AAZO01004444.1/55394-55292 121224:Pediculus
humanus corporis (human body louse)
Length = 103
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtag 75
||||||||||||||||||||||||||
Sbjct: 58 atgttattgcttgagaatacacgtag 83
>RF00694;mir-137;BAAB01088495.1/2035-1935 7091:Bombyx mori
(domestic silkworm)
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtag 75
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAJJ01002111.1/15264-15166 7070:Tribolium
castaneum (red flour beetle)
Length = 99
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtag 75
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAWZ01010620.1/48359-48459 28377:Anolis
carolinensis (green anole)
Length = 101
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgtagtt 77
||||||||||||||||||| |||||||
Sbjct: 56 tgttattgcttgagaatacgcgtagtt 82
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtagt 76
|||||||||||||||||||| ||||||
Sbjct: 55 atgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtagt 76
|||||||||||||||||||| ||||||
Sbjct: 56 atgttattgcttgagaatacgcgtagt 82
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtagt 76
|||||||||||||||||||| ||||||
Sbjct: 55 atgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;ABJB010513068.1/3224-3122 6945:Ixodes scapularis
(black-legged tick)
Length = 103
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgt 73
|||||||||||||||||||||||
Sbjct: 59 tgttattgcttgagaatacacgt 81
>RF00694;mir-137;AAPN01296459.1/4449-4348 9258:Ornithorhynchus
anatinus (platypus)
Length = 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgttattgcttgagaatacacgtagt 76
||||||||||||||||||| ||||||
Sbjct: 56 tgttattgcttgagaatacgcgtagt 81
>RF00694;mir-137;BAAF04063265.1/5995-5897 8090:Oryzias latipes
(Japanese medaka)
Length = 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 50 atgttattgcttgagaatacacgtag 75
|||||||||||||||||||| |||||
Sbjct: 55 atgttattgcttgagaatacgcgtag 80
