miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAKO01000155.1/113509-113420 7238:Drosophila
          sechellia
          Length = 90

 Score =  170 bits (86), Expect = 2e-42
 Identities = 89/90 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ttgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggtt 60
          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1  ttgctgactttgagtcttggcactgggagaattcacagttgacttgattattctgtggtt 60

                                        
Query: 61 ctgcgggtgccaaaacttaaaaaccggctt 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 ctgcgggtgccaaaacttaaaaaccggctt 90




>RF00706;mir-263;AAPQ01006581.1/272485-272396 7220:Drosophila
          erecta
          Length = 90

 Score =  139 bits (70), Expect = 7e-33
 Identities = 76/78 (97%)
 Strand = Plus / Plus

                                                                      
Query: 3  gctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttct 62
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3  gctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggttct 62

                            
Query: 63 gcgggtgccaaaacttaa 80
          ||||||||||||| ||||
Sbjct: 63 gcgggtgccaaaatttaa 80




>RF00706;mir-263;AAPP01019315.1/707685-707774 7217:Drosophila
          ananassae
          Length = 90

 Score =  123 bits (62), Expect = 4e-28
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                      
Query: 2  tgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttc 61
          ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2  tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 61

                        
Query: 62 tgcgggtgccaaaa 75
          ||||||||||||||
Sbjct: 62 tgcgggtgccaaaa 75




>RF00706;mir-263;AAQB01006546.1/140884-140979 7260:Drosophila
          willistoni
          Length = 96

 Score = 73.8 bits (37), Expect = 3e-13
 Identities = 60/66 (90%), Gaps = 5/66 (7%)
 Strand = Plus / Plus

                                                                      
Query: 15 tcttggcactgggagaattcacagttgact-ttat----tattctgtggttctgcgggtg 69
          |||||||||||||||||||||||||||| | ||||    |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 74

                
Query: 70 ccaaaa 75
          ||||||
Sbjct: 75 ccaaaa 80




>RF00706;mir-263;AANI01017489.1/74722-74633 7244:Drosophila
          virilis
          Length = 90

 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 57/63 (90%), Gaps = 2/63 (3%)
 Strand = Plus / Plus

                                                                      
Query: 15 tcttggcactgggagaattcacagttgactttat--tattctgtggttctgcgggtgcca 72
          ||||||||||||||||||||||||| || |  ||  ||||||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagtcgattacataatattctgtggttctgcgggtgcca 73

             
Query: 73 aaa 75
          |||
Sbjct: 74 aaa 76




>RF00706;mir-263;AAFS01001003.1/35414-35505 46245:Drosophila
          pseudoobscura pseudoobscura
          Length = 92

 Score = 69.9 bits (35), Expect = 5e-12
 Identities = 58/63 (92%), Gaps = 2/63 (3%)
 Strand = Plus / Plus

                                                                      
Query: 15 tcttggcactgggagaattcacagttgactt-tat-tattctgtggttctgcgggtgcca 72
          |||||||||||||||||||||||||||  ||  || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74

             
Query: 73 aaa 75
          |||
Sbjct: 75 aaa 77




>RF00706;mir-263;ABKP02026803.1/39465-39371 377271:Anopheles
          gambiae M
          Length = 95

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 cttggcactgggagaattcacagt 39
          ||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39




>RF00706;mir-263;AADK01025663.1/3361-3450 7091:Bombyx mori
          (domestic silkworm)
          Length = 90

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 cttggcactgggagaattcacag 38
          |||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38




>RF00706;mir-263;AAGE02001908.1/33266-33358 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 93

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 cttggcactgggagaattcacag 38
          |||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38