miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00706;mir-263;AAKO01000155.1/113509-113420 7238:Drosophila
sechellia
Length = 90
Score = 170 bits (86), Expect = 2e-42
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 ttgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggtt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ttgctgactttgagtcttggcactgggagaattcacagttgacttgattattctgtggtt 60
Query: 61 ctgcgggtgccaaaacttaaaaaccggctt 90
||||||||||||||||||||||||||||||
Sbjct: 61 ctgcgggtgccaaaacttaaaaaccggctt 90
>RF00706;mir-263;AAPQ01006581.1/272485-272396 7220:Drosophila
erecta
Length = 90
Score = 139 bits (70), Expect = 7e-33
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 3 gctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttct 62
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3 gctgactttgagtcttggcactgggagaattcacagttgattttattattctgtggttct 62
Query: 63 gcgggtgccaaaacttaa 80
||||||||||||| ||||
Sbjct: 63 gcgggtgccaaaatttaa 80
>RF00706;mir-263;AAPP01019315.1/707685-707774 7217:Drosophila
ananassae
Length = 90
Score = 123 bits (62), Expect = 4e-28
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 2 tgctgactttgagtcttggcactgggagaattcacagttgactttattattctgtggttc 61
||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 tgctgtctttgaatcttggcactgggagaattcacagttgattttattattctgtggttc 61
Query: 62 tgcgggtgccaaaa 75
||||||||||||||
Sbjct: 62 tgcgggtgccaaaa 75
>RF00706;mir-263;AAQB01006546.1/140884-140979 7260:Drosophila
willistoni
Length = 96
Score = 73.8 bits (37), Expect = 3e-13
Identities = 60/66 (90%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttgact-ttat----tattctgtggttctgcgggtg 69
|||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggtg 74
Query: 70 ccaaaa 75
||||||
Sbjct: 75 ccaaaa 80
>RF00706;mir-263;AANI01017489.1/74722-74633 7244:Drosophila
virilis
Length = 90
Score = 71.9 bits (36), Expect = 1e-12
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttgactttat--tattctgtggttctgcgggtgcca 72
||||||||||||||||||||||||| || | || ||||||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagtcgattacataatattctgtggttctgcgggtgcca 73
Query: 73 aaa 75
|||
Sbjct: 74 aaa 76
>RF00706;mir-263;AAFS01001003.1/35414-35505 46245:Drosophila
pseudoobscura pseudoobscura
Length = 92
Score = 69.9 bits (35), Expect = 5e-12
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 15 tcttggcactgggagaattcacagttgactt-tat-tattctgtggttctgcgggtgcca 72
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
Query: 73 aaa 75
|||
Sbjct: 75 aaa 77
>RF00706;mir-263;ABKP02026803.1/39465-39371 377271:Anopheles
gambiae M
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>RF00706;mir-263;AADK01025663.1/3361-3450 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacag 38
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>RF00706;mir-263;AAGE02001908.1/33266-33358 7159:Aedes aegypti
(yellow fever mosquito)
Length = 93
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacag 38
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
