miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00786;mir-289;AAEU02000202.1/398546-398448 7245:Drosophila
yakuba
Length = 99
Score = 172 bits (87), Expect = 5e-43
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 1 gagtttacagtaaaataaatatttaagtggagcctgcgacttcagtccctctgactgact 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gagtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgact 60
Query: 61 ggggtaagtcacttgagcgtttgttggcacgtaaaagac 99
|||||||||| || |||||||||||||||||||||||||
Sbjct: 61 ggggtaagtctctcgagcgtttgttggcacgtaaaagac 99
>RF00786;mir-289;AAIZ01008625.1/677-776 7234:Drosophila persimilis
Length = 100
Score = 95.6 bits (48), Expect = 1e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 1 gagtttacagtaaaataaatatttaagtggagcctgcgact-tcagtccctctgactgac 59
||||||||||| ||||||||||||||||||||||||||||| | ||| || | |||
Sbjct: 1 gagtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgac 60
Query: 60 tggggtaagtcacttgagcgtttgttggcacgtaaaagac 99
|||| ||| |||||||||||||||||||||||||||||||
Sbjct: 61 tgggctaactcacttgagcgtttgttggcacgtaaaagac 100
>RF00786;mir-289;AASU01020046.1/1545-1606 7240:Drosophila simulans
Length = 62
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 19 atatttaagtggagcctgcgacttcagtccctctgactgactggggtaa 67
||||||||||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 1 atatttaagtggagcctgcgactccggtccctcagactgactggggtaa 49
>RF00786;mir-289;AANI01017445.1/15868-15797 7244:Drosophila
virilis
Length = 72
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 66 aagtcacttgagcgtttgttggcacgtaaaagac 99
||||||||||| ||||||||||||||||||||||
Sbjct: 39 aagtcacttgaacgtttgttggcacgtaaaagac 72
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gagtttacagtaaaataaatatttaagtgg 30
||||||||||||||||||||||| ||||||
Sbjct: 1 gagtttacagtaaaataaatattgaagtgg 30
