miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01001527.1/885-965 4558:Sorghum bicolor
           (sorghum)
          Length = 81

 Score = 50.1 bits (25), Expect = 2e-05
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 358 ggtactccctccgtcccaaattata 382
           |||||||||||||||||||||||||
Sbjct: 79  ggtactccctccgtcccaaattata 55




>RF00906;MIR1122;AP008215.1/18970521-18970611 39947:Oryza sativa
           Japonica Group
          Length = 91

 Score = 46.1 bits (23), Expect = 4e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 360 tactccctccgtcccaaattatagttg 386
           |||||||||||||||||| ||||||||
Sbjct: 5   tactccctccgtcccaaaatatagttg 31