miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00814;mir-316;AANI01017487.1/102971-103058 7244:Drosophila
          virilis
          Length = 88

 Score =  115 bits (58), Expect = 1e-25
 Identities = 77/82 (93%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                      
Query: 4  ttctagtcgatttgtctttttccgcttactggcgtttcaattccacaacgacaggaaagg 63
          |||||||||||||||||||||||||||||||||||||  |||   |||||||||||||||
Sbjct: 4  ttctagtcgatttgtctttttccgcttactggcgttt-tattgagcaacgacaggaaagg 62

                                
Query: 64 gaaaaaggcgtatttactatga 85
          ||||||||||||||||||||||
Sbjct: 63 gaaaaaggcgtatttactatga 84




>RF00814;mir-316;AAWU01024441.1/4794-4714 7176:Culex
          quinquefasciatus (southern house mosquito)
          Length = 81

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 gatttgtctttttccgcttactg 34
          |||||||||||||||||||||||
Sbjct: 7  gatttgtctttttccgcttactg 29




>RF00814;mir-316;AAGE02013460.1/10825-10737 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 89

 Score = 46.1 bits (23), Expect = 7e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 gatttgtctttttccgcttactg 34
          |||||||||||||||||||||||
Sbjct: 12 gatttgtctttttccgcttactg 34