miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AC120885.3/98724-98570 39947:Oryza sativa Japonica
Group
Length = 155
Score = 307 bits (155), Expect = 3e-83
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 13 gttttactctctccgtcccaatatatagcaacctaggatgggacccatcctaggactttg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttttactctctccgtcccaatatatagcaacctaggatgggacccatcctaggactttg 60
Query: 73 aatctggacccatcctaggacttcgaagtcctaggatggtctaatggtctaatcccatcc 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatctggacccatcctaggacttcgaagtcctaggatggtctaatggtctaatcccatcc 120
Query: 133 taggttgttgcatattgggacggagggagtagtaa 167
|||||||||||||||||||||||||||||||||||
Sbjct: 121 taggttgttgcatattgggacggagggagtagtaa 155
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 82 ccatcctaggacttcgaagtcctaggatgg 111
||||||||||||||||||||||||||||||
Sbjct: 99 ccatcctaggacttcgaagtcctaggatgg 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 125 tcccatcctaggttgttgcatattgggacggagggagta 163
||||||||||||||| | |||||||||||||| |||||
Sbjct: 43 tcccatcctaggttgctatatattgggacggagagagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||||||||| | |||||||||||||||
Sbjct: 151 tactccctccgtcccaatatgcaacaacctaggatggga 113
>RF00906;MIR1122;AF229199.1/5910-5994 4530:Oryza sativa (rice)
Length = 85
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatgggacccatcctagg 66
||||| |||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 5 tactccctccgtcccaatatatagcaacctaggatgagacccatcatagg 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatgggacccatcctagg 66
||||| ||||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 81 tactccctccgtcccaatatatagcaacctatgatgggtctcatcctagg 32
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 128 catcctaggttgttgcatattgggacggagggagtagt 165
|||||||||||| | ||||||||||||||||||||||
Sbjct: 40 catcctaggttgctatatattgggacggagggagtagt 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 126 cccatcctaggttgttgcatattgggacggagggagta 163
|||||| ||||||| | ||||||||||||||||||||
Sbjct: 44 cccatcataggttgctatatattgggacggagggagta 81
>RF00906;MIR1122;AAAA02000256.1/46704-46855 39946:Oryza sativa
Indica Group
Length = 152
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 118 ggtctaatcccatcctaggttgttgcatattgggacggagggagtagt 165
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 50 ggtctaatcccatcctaggttgtaatatattgggacggagggagtagt 3
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccaatatattacaacctaggatggga 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 16 ttactctctccgtcccaatatatagcaacctagga 50
|||||| |||||||||||||||| ||||||||||
Sbjct: 149 ttactccctccgtcccaatatattacaacctagga 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 tcctaggttgttgcatattgggacggagggagta 163
||||||||||| ||||||||||||||||||||
Sbjct: 115 tcctaggttgtaatatattgggacggagggagta 148
>RF00906;MIR1122;AC051624.6/28401-28549 4530:Oryza sativa (rice)
Length = 149
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 15 tttactctctccgtcccaatatatagcaacctaggatgggac 56
||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 3 tttactccctccgtcccaatatgtagcaacctaggatgggac 44
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 118 ggtctaatcccatcctaggttgttgcatattgggacggagggagta 163
|||||| ||||||||||||||| | |||||||||||||||||||||
Sbjct: 50 ggtctagtcccatcctaggttgctacatattgggacggagggagta 5
>RF00906;MIR1122;BX000499.1/44774-44875 4530:Oryza sativa (rice)
Length = 102
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggg 54
||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactctctccgtcccaaaatatagcaacctaggatggg 42
>RF00906;MIR1122;AC107224.2/133743-133852 39947:Oryza sativa
Japonica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 119 gtctaatcccatcctaggttgttgcatattgggacggagggagta 163
|||||||||||||||||| || | |||||||||||||||||||||
Sbjct: 62 gtctaatcccatcctaggatgctacatattgggacggagggagta 106
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 106 tactccctccgtcccaatatgtagcatcctaggatggga 68
>RF00906;MIR1122;CR855162.1/49052-49181 4530:Oryza sativa (rice)
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 120 tctaatcccatcctaggttgttgcatattgggacggagggagtag 164
|||||||||||||||||||| | ||||| ||||||||||||||||
Sbjct: 83 tctaatcccatcctaggttgctacatatcgggacggagggagtag 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 120 tctaatcccatcctaggttgttgcatattgggacggagggagtagt 165
|||||||||||||||||||| | ||||| || ||||||||||||||
Sbjct: 48 tctaatcccatcctaggttgctacatatcggaacggagggagtagt 3
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| ||||||||| |||| ||||||||||||||||||
Sbjct: 126 tactccctccgtcccgatatgtagcaacctaggatggga 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||| || |||| ||||||||||||||||||
Sbjct: 5 tactccctccgttccgatatgtagcaacctaggatggga 43
>RF00906;MIR1122;AC213908.1/124220-124111 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 119 gtctaatcccatcctaggttgttgcatattgggacggagggagta 163
|||||||||||||||||| || | |||||||||||||||||||||
Sbjct: 49 gtctaatcccatcctaggatgctacatattgggacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaatatgtagcatcctaggatggga 43
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| ||||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatatagcaacctaggatggga 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 125 tcccatcctaggttgttgcatattgggacggagggagtagta 166
||||||||||||||| | || ||||||||||||||||||||
Sbjct: 43 tcccatcctaggttgctatattttgggacggagggagtagta 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| ||||||||||| ||||||||||||||||
Sbjct: 82 tactccctccgtcccaaaatatagcaacctagga 49
>RF00906;MIR1122;AAAA02024403.1/20133-20023 39946:Oryza sativa
Indica Group
Length = 111
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| ||||||||||||||||||||||||||||
Sbjct: 107 tactccctccgtcccaatatatagcaacctagga 74
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 15 tttactctctccgtcccaatatatagcaacctagga 50
||||||| ||||||||||||||||||||||| ||||
Sbjct: 3 tttactccctccgtcccaatatatagcaaccgagga 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 tcctaggttgttgcatattgggacggagggagta 163
|||||||||| | ||||||||||||||||||||
Sbjct: 74 tcctaggttgctatatattgggacggagggagta 107
>RF00906;MIR1122;AP008214.1/11549737-11549627 39947:Oryza sativa
Japonica Group
Length = 111
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaatatatagcaacctagga 38
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 15 tttactctctccgtcccaatatatagcaacctagga 50
||||||| ||||||||||||||||||||||| ||||
Sbjct: 109 tttactccctccgtcccaatatatagcaaccgagga 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 130 tcctaggttgttgcatattgggacggagggagta 163
|||||||||| | ||||||||||||||||||||
Sbjct: 38 tcctaggttgctatatattgggacggagggagta 5
>RF00906;MIR1122;AP008211.1/26603847-26603929 39947:Oryza sativa
Japonica Group
Length = 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 124 atcccatcctaggttgttgcatattgggacggagggagtag 164
||||||||||||| || | ||||||||||||||||||||||
Sbjct: 44 atcccatcctaggctgctacatattgggacggagggagtag 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaatatgtagcagcctaggatggga 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 24 tccgtcccaatatatagcaacctagg 49
||||||||||||||||||||||||||
Sbjct: 72 tccgtcccaatatatagcaacctagg 47
>RF00906;MIR1122;AP006460.4/47395-47544 39947:Oryza sativa Japonica
Group
Length = 150
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatgggacccatcctaggactttgaatc 76
||||| |||||||||| || ||||||||||||||||| |||| ||| |||| ||||||
Sbjct: 146 tactccctccgtcccagtacgtagcaacctaggatgggttccatactacgactatgaatc 87
Query: 77 tggac 81
|||||
Sbjct: 86 tggac 82
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 126 cccatcctaggttgttgcatattgggacggagggagtagta 166
|||||||||||||| | | || |||||||||||||||||||
Sbjct: 109 cccatcctaggttgctacgtactgggacggagggagtagta 149
>RF00906;MIR1122;AC137589.2/147211-147089 39947:Oryza sativa
Japonica Group
Length = 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatgggacc 57
||||| |||||||||| |||||||||||||||||||||||
Sbjct: 119 tactccctccgtcccataatatagcaacctaggatgggacc 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 16 ttactctctccgtcccaatatatagcaacctaggatggga 55
|||||| ||||||| || |||||||||||||||||||||
Sbjct: 4 ttactccctccgtctcataatatagcaacctaggatggga 43
>RF00906;MIR1122;AAAA02022559.1/10581-10446 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatgggacccatcctaggactttgaatc 76
||||| ||||||||||||| ||||||||||||||||| |||| ||| |||| | ||||
Sbjct: 132 tactccctccgtcccaatacgtagcaacctaggatgggttccatactacgactataaatc 73
Query: 77 tggac 81
|||||
Sbjct: 72 tggac 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 126 cccatcctaggttgttgcatattgggacggagggagtagta 166
|||||||||||||| | | ||||||||||||||||||||||
Sbjct: 95 cccatcctaggttgctacgtattgggacggagggagtagta 135
>RF00906;MIR1122;AACV01024602.1/9476-9344 39947:Oryza sativa
Japonica Group
Length = 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/57 (87%), Gaps = 4/57 (7%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatgg----gacccatcctaggact 69
||||| |||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 129 tactccctccgtcccagaatatagcaacctaggatggatgagacccatcctaggact 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 14 ttttactctctccgtcccaatatatagcaacctaggatggga 55
||||||| |||||||| | |||||||||||||||||||||
Sbjct: 2 ttttactacctccgtcctaggatatagcaacctaggatggga 43
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 124 atcccatcctaggttgttgcatattgggacggagggagta 163
|||||||||||||||||| || |||||||||||||||||
Sbjct: 86 atcccatcctaggttgttttattttgggacggagggagta 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| ||||||||||| ||| | |||||||||||||||
Sbjct: 125 tactccctccgtcccaaaataaaacaacctaggatggga 87
>RF00906;MIR1122;AP008218.1/13540804-13540671 39947:Oryza sativa
Japonica Group
Length = 134
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||||| |||||||||||||||||||||
Sbjct: 130 tactccctccgtcccagaatatagcaacctaggatggga 92
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 118 ggtctaatcccatcctaggttgttgcatattgggacggagggagtag 164
||||| |||||||||||||||| | || |||||||||||||||||
Sbjct: 85 ggtctcatcccatcctaggttgctatattctgggacggagggagtag 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 14 ttttactctctccgtcccaatatatagcaacctaggatggga 55
||||||| |||||||| | |||||||||||||||||||||
Sbjct: 2 ttttactacctccgtcctaggatatagcaacctaggatggga 43
>RF00906;MIR1122;AACV01011125.1/13959-13873 39947:Oryza sativa
Japonica Group
Length = 87
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 16 ttactctctccgtcccaatatatagcaacctagga 50
|||||| ||||||||||| ||||||||||||||||
Sbjct: 4 ttactccctccgtcccaaaatatagcaacctagga 38
>RF00906;MIR1122;AC107206.4/146916-146800 39947:Oryza sativa
Japonica Group
Length = 117
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 16 ttactctctccgtcccaatatatagcaacctagga 50
|||||| |||||||||||||| |||||||||||||
Sbjct: 114 ttactccctccgtcccaatatgtagcaacctagga 80
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 118 ggtctaatcccatcctaggttgttgcatattgggacggagggagta 163
|||||||| ||||| ||||||| | |||||||||||| ||||||||
Sbjct: 50 ggtctaattccatcttaggttgctacatattgggacgaagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 130 tcctaggttgttgcatattgggacggagggagta 163
|||||||||| | |||||||||||||||||||||
Sbjct: 80 tcctaggttgctacatattgggacggagggagta 113
>RF00906;MIR1122;AACV01010461.1/90514-90643 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 123 aatcccatcctaggttgttgcatattgggacggagggagtag 164
|||| |||||||||||| | ||||| ||||||||||||||||
Sbjct: 86 aatctcatcctaggttgctacatatcgggacggagggagtag 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatg 52
||||| ||||||||| |||| |||||||||||||||
Sbjct: 126 tactccctccgtcccgatatgtagcaacctaggatg 91
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 127 ccatcctaggttgttgcatattgggacggagggagtagt 165
||||||||||||| | ||||| || ||||||||||||||
Sbjct: 41 ccatcctaggttgctacatatcggaacggagggagtagt 3
>RF00906;MIR1122;AP008212.1/21312652-21312767 39947:Oryza sativa
Japonica Group
Length = 116
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 19 ctctctccgtcccaatatatagcaacctag 48
||||||||||||||| ||||||||||||||
Sbjct: 116 ctctctccgtcccaaaatatagcaacctag 87
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacct 46
||||||||||||||||| ||||||||||||
Sbjct: 5 tactctctccgtcccaaaatatagcaacct 34
>RF00906;MIR1122;AP008208.1/9514407-9514515 39947:Oryza sativa
Japonica Group
Length = 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| ||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatatagcaacctagga 38
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 119 gtctaatcccatcctaggttgttgcatattgggacggagggagtag 164
||||||||| |||||||||| | || ||||||||||||||||||
Sbjct: 49 gtctaatccggtcctaggttgctatattttgggacggagggagtag 4
>RF00906;MIR1122;AAAA02005682.1/11197-11089 39946:Oryza sativa
Indica Group
Length = 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| ||||||||||| ||||||||||||||||
Sbjct: 105 tactccctccgtcccaaaatatagcaacctagga 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 119 gtctaatcccatcctaggttgttgcatattgggacggagggagtag 164
||||||||| |||||||||| | || ||||||||||||||||||
Sbjct: 61 gtctaatccggtcctaggttgctatattttgggacggagggagtag 106
>RF00906;MIR1122;AACV01024802.1/12019-12139 39947:Oryza sativa
Japonica Group
Length = 121
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| ||||||||||| ||||||||||||||||
Sbjct: 117 tactccctccgtcccaaaatatagcaacctagga 84
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 23 ctccgtcccaatatatagcaacctagga 50
||||||||||| ||||||||||||||||
Sbjct: 11 ctccgtcccaaaatatagcaacctagga 38
>RF00906;MIR1122;AAAA02035395.1/16532-16668 39946:Oryza sativa
Indica Group
Length = 137
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 118 ggtctaatcccatcctaggttgttgcatattgggacggagggagta 163
||||| |||||||||||||||||| ||| |||||||||| |||||
Sbjct: 88 ggtctcatcccatcctaggttgttacattctgggacggagagagta 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
|||||||||||||||| || || |||||||||||||||
Sbjct: 133 tactctctccgtcccagaatgtaacaacctaggatggga 95
>RF00906;MIR1122;AAAA02039729.1/233-133 39946:Oryza sativa Indica
Group
Length = 101
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 48 ggatgggacccatcctaggactttgaatctgga-cccatcctagg 91
||||| |||||||||||||||| ||||||||| |||||||||||
Sbjct: 76 ggatgagacccatcctaggactacgaatctggatcccatcctagg 32
>RF00906;MIR1122;AAAA02010985.1/48487-48349 39946:Oryza sativa
Indica Group
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 46 taggatgggacccatcctaggactttgaatctg 78
||||||| |||||||||||||||| ||||||||
Sbjct: 83 taggatgagacccatcctaggactatgaatctg 51
>RF00906;MIR1122;AAAA02034525.1/2762-2656 39946:Oryza sativa
Indica Group
Length = 107
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 38 tagcaacctaggatgggacccatcctagg 66
|||||| ||||||||||||||||||||||
Sbjct: 45 tagcaatctaggatgggacccatcctagg 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 39 agcaacctaggatgggacccatcctag 65
|||||||||||||||| ||||||||||
Sbjct: 78 agcaacctaggatgggtcccatcctag 52
>RF00906;MIR1122;AAAA02017758.1/21324-21484 39946:Oryza sativa
Indica Group
Length = 161
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggg-----acccatcctaggacttt 71
||||| |||||||||||||||| |||| ||||||| || |||||||||||||| |
Sbjct: 5 tactccctccgtcccaatatattgcaatctaggataggtctaatcccatcctaggactat 64
Query: 72 gaatctgga 80
|||||||||
Sbjct: 65 gaatctgga 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggat 51
||||| ||| |||||||||||| ||||||||||||
Sbjct: 157 tactccctctgtcccaatatattgcaacctaggat 123
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctag 48
||||| ||||||||||| ||||||||||||||
Sbjct: 158 tactccctccgtcccaaaatatagcaacctag 127
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctag 48
||||||||| ||||||| ||||||||||||||
Sbjct: 5 tactctctctgtcccaaaatatagcaacctag 36
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctag 48
||||| ||||||||||| ||||||||||||||
Sbjct: 109 tactccctccgtcccaaaatatagcaacctag 78
>RF00906;MIR1122;AC226782.1/54692-54560 63629:Oryza minuta
Length = 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 23 ctccgtcccaatatatagcaacctagga 50
||||||||||| ||||||||||||||||
Sbjct: 123 ctccgtcccaaaatatagcaacctagga 96
>RF00906;MIR1122;AAAA02027850.1/6458-6302 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctag 48
|||||||||||||||| ||||||||||||||
Sbjct: 5 tactctctccgtcccagaatatagcaacctag 36
>RF00906;MIR1122;AAAA02012587.1/870-973 39946:Oryza sativa Indica
Group
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatg 52
||||| ||||||||||| || |||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatctagcaacctaggatg 40
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 128 catcctaggttgttgcatattgggacggagggagtagt 165
|||||||||||| | || |||||||||||||||||||
Sbjct: 40 catcctaggttgctagattttgggacggagggagtagt 3
>RF00906;MIR1122;AP004120.3/28200-28332 39947:Oryza sativa
Japonica Group
Length = 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 46 taggatgggacccatcctaggactttgaatctggac 81
||||||| |||||||||||||||| ||||||||||
Sbjct: 39 taggatgagacccatcctaggactacgaatctggac 74
>RF00906;MIR1122;AP008216.1/17249383-17249263 39947:Oryza sativa
Japonica Group
Length = 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 124 atcccatcctaggttgttgcatattgggacggagggagta 163
|||||||||||||||||| || ||||||||||||||||
Sbjct: 78 atcccatcctaggttgttatattctgggacggagggagta 117
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||||| ||||| |||||||||||||||
Sbjct: 117 tactccctccgtcccagaatataacaacctaggatggga 79
>RF00906;MIR1122;AP006171.2/9738-9583 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 124 atcccatcctaggttgttgcatattgggacggagggagtagtaa 167
||||| |||||||||| | | | |||||||||||||||||||||
Sbjct: 113 atcccctcctaggttgcttctttttgggacggagggagtagtaa 156
>RF00906;MIR1122;AAAA02007456.1/5960-5794 39946:Oryza sativa Indica
Group
Length = 167
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 126 cccatcctaggttgttgcatattgggacggagggagtagt 165
||||||||| ||||| ||||||||||||||||||||||
Sbjct: 42 cccatcctaagttgtaatatattgggacggagggagtagt 3
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggg 54
||||| |||||||||||||||| |||| |||||||||
Sbjct: 5 tactccctccgtcccaatatattacaacttaggatggg 42
>RF00906;MIR1122;AL837527.2/103601-103675 4530:Oryza sativa (rice)
Length = 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 ttactctctccgtcccaatatatagcaa 43
|||||| |||||||||||||||||||||
Sbjct: 72 ttactccctccgtcccaatatatagcaa 45
>RF00906;MIR1122;AL663014.3/90673-90776 39947:Oryza sativa
Japonica Group
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatg 52
||||| ||||||||||| || |||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatctagcaacctaggatg 40
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 128 catcctaggttgttgcatattgggacggagggagtagt 165
|||||||||||| | || |||||||||||||||||||
Sbjct: 40 catcctaggttgctagattttgggacggagggagtagt 3
>RF00906;MIR1122;AACV01008253.1/5342-5216 39947:Oryza sativa
Japonica Group
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 119 gtctaatcccatcctaggttgttgcatattgggacggagg 158
|||||||||||||||| |||||| |||||||||||||||
Sbjct: 48 gtctaatcccatccta-gttgttatatattgggacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 137 ttgttgcatattgggacggagggagtag 164
||||| ||||||||||||||||||||||
Sbjct: 97 ttgttacatattgggacggagggagtag 124
>RF00906;MIR1122;AAAA02011148.1/13497-13379 39946:Oryza sativa
Indica Group
Length = 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 132 ctaggttgttgcatattgggacggagggagta 163
|||||||| | |||||||||||||||||||||
Sbjct: 36 ctaggttgctacatattgggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctag 48
||||| |||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtcccaatatgtagcaacctag 36
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 118 ggtctaatcccatcctaggttgttgcatattgggacggagggagta 163
|||||||| |||||||| ||| | |||||||||||||| ||||||
Sbjct: 70 ggtctaattccatcctaaattgctacatattgggacggatggagta 115
>RF00906;MIR1122;AAAA02005537.1/4098-4188 39946:Oryza sativa
Indica Group
Length = 91
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 16 ttactctctccgtcccaatatatagcaacct 46
|||||| ||||||||||| ||||||||||||
Sbjct: 88 ttactccctccgtcccaaaatatagcaacct 58
>RF00906;MIR1122;AACV01004460.1/3202-3065 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 121 ctaatcccatcctaggttgttgcatattgggacggagggagta 163
||||||||||||||||||| | ||| ||||||||| ||||||
Sbjct: 47 ctaatcccatcctaggttgctacattatgggacggatggagta 5
>RF00906;MIR1122;AACV01010936.1/15061-14959 39947:Oryza sativa
Japonica Group
Length = 103
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 126 cccatcctaggttgttgcatattgggacggagggagtag 164
|||||||||||||| | ||| |||||||||||||||||
Sbjct: 42 cccatcctaggttgctacattatgggacggagggagtag 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggg 54
||||| |||||||||| || |||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtagcaacctaggatggg 42
>RF00906;MIR1122;AAAA02015439.1/1131-1234 39946:Oryza sativa Indica
Group
Length = 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 126 cccatcctaggttgttgcatattgggacggagggagtag 164
|||||||||||||| | ||| |||||||||||||||||
Sbjct: 42 cccatcctaggttgctacattatgggacggagggagtag 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggg 54
||||| |||||||||| || |||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtagcaacctaggatggg 42
>RF00906;MIR1122;AACV01021120.1/13659-13774 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 126 cccatcctaggttgttgcatattgggacggagggagtag 164
|||||||||||||| | ||| |||||||||||||||||
Sbjct: 42 cccatcctaggttgctacattatgggacggagggagtag 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 118 ggtctaatcccatcctaggttgttgcatattgggacggagggagtag 164
||||| ||| |||||||||||| | ||| |||||||||||||||||
Sbjct: 67 ggtctcatctcatcctaggttgctacattatgggacggagggagtag 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggg 54
||||| |||||||||| || |||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtagcaacctaggatggg 42
>RF00906;MIR1122;AC121365.2/5093-5004 39947:Oryza sativa Japonica
Group
Length = 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 144 atattgggacggagggagtagta 166
|||||||||||||||||||||||
Sbjct: 67 atattgggacggagggagtagta 89
>RF00906;MIR1122;AC135925.2/164047-164190 39947:Oryza sativa
Japonica Group
Length = 144
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| ||| |||| ||||||| ||||||||||||||||
Sbjct: 140 tactccctctgtcctaatatattgcaacctaggatggga 102
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 acccatcctaggactttgaatctgga 80
||||||||||||||| ||||||||||
Sbjct: 31 acccatcctaggactatgaatctgga 56
>RF00906;MIR1122;AP008217.1/10919176-10919047 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 tccgtcccaatatatagcaacctagga 50
|||||||||| ||||||||||||||||
Sbjct: 12 tccgtcccaaaatatagcaacctagga 38
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||||| || ||| |||||||||||||||||
Sbjct: 149 tactccctccgtcctaaaataaagcaacctaggatggga 111
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 124 atcccatcctaggttgttgcatattgggacggagggagtagt 165
|||||||||||||||| | || || ||||||||||||||||
Sbjct: 110 atcccatcctaggttgctttattttaggacggagggagtagt 151
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctaggatggga 55
||||| |||||| |||| |||||||||||||||| ||||
Sbjct: 5 tactccctccgttccaaaatatagcaacctaggagggga 43
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaaccta 47
||||| ||||||||||| |||||||||||||
Sbjct: 103 tactccctccgtcccaaaatatagcaaccta 73
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacct 46
||||| ||||||||||| ||||||||||||
Sbjct: 127 tactccctccgtcccaaaatatagcaacct 98
>RF00906;MIR1122;AAAA02021210.1/61042-60904 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 48 ggatgggacccatcctaggactttgaatctggac 81
||||||||| |||||||| ||| |||||||||||
Sbjct: 49 ggatgggacacatcctagtactatgaatctggac 82
>RF00906;MIR1122;AAAA02020131.1/32717-32877 39946:Oryza sativa
Indica Group
Length = 161
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 gttttactctctccgtcccaatatat 38
||||||||| ||||||||||||||||
Sbjct: 1 gttttactccctccgtcccaatatat 26
>RF00906;MIR1122;AAAA02030634.1/11870-11745 39946:Oryza sativa
Indica Group
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 48 ggatgggacccatcctaggactttgaatctggac 81
||||| |||||||||||| ||| |||||||||||
Sbjct: 41 ggatgagacccatcctagtactatgaatctggac 74
>RF00906;MIR1122;AACV01022269.1/33793-33668 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 48 ggatgggacccatcctaggactttgaatctggac 81
||||| |||||||||||||||| ||||||||||
Sbjct: 41 ggatgagacccatcctaggactacgaatctggac 74
>RF00906;MIR1122;AAAA02003912.1/60341-60484 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 125 tcccatcctaggttgttgcatattgggacggagggagtagta 166
|||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 102 tcccatcctaggttgtaacattatgggatggagggagtagta 143
>RF00906;MIR1122;AAAA02028214.1/4483-4403 39946:Oryza sativa
Indica Group
Length = 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| ||||||||||||||||| |||||||||
Sbjct: 77 tactccctccgtcccaatatataagaacctagga 44
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 tcctaggttgttgcatattgggacggagggagta 163
||||||||| || ||||||||||||||||||||
Sbjct: 44 tcctaggttcttatatattgggacggagggagta 77
>RF00906;MIR1122;AAAA02013867.1/52-181 39946:Oryza sativa Indica
Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 124 atcccatcctaggttgttgcatattgggacggagggagtagt 165
|||| ||||||||||||| || || ||||||||||||||||
Sbjct: 87 atccgatcctaggttgttatattttaggacggagggagtagt 128
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
|||| |||||||||||| ||||||||| ||||||
Sbjct: 5 tactatctccgtcccaaaatatagcaatctagga 38
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacct 46
||||| ||||||||||| ||||||||||||
Sbjct: 127 tactccctccgtcccaaaatatagcaacct 98
>RF00906;MIR1122;AACV01010712.1/16660-16524 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 144 atattgggacggagggagtagt 165
||||||||||||||||||||||
Sbjct: 24 atattgggacggagggagtagt 3
>RF00906;MIR1122;AAAA02016998.1/2818-2950 39946:Oryza sativa Indica
Group
Length = 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| |||||||||| ||||||||||||||||
Sbjct: 129 tactccctccgtcccagaatatagcaacctagga 96
>RF00906;MIR1122;AAAA02033944.1/2808-2932 39946:Oryza sativa Indica
Group
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 144 atattgggacggagggagtagt 165
||||||||||||||||||||||
Sbjct: 102 atattgggacggagggagtagt 123
>RF00906;MIR1122;AC134256.4/172189-172345 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| |||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtcccataatatagcaacctagga 38
>RF00906;MIR1122;AP004341.2/44463-44329 39947:Oryza sativa Japonica
Group
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 144 atattgggacggagggagtagt 165
||||||||||||||||||||||
Sbjct: 24 atattgggacggagggagtagt 3
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||||||||||||||| ||||| |||||||||
Sbjct: 5 tactctctccgtcccaaaatataagaacctagga 38
>RF00906;MIR1122;AAAA02028867.1/14372-14216 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacctagga 50
||||| |||||||||| ||||||||||||||||
Sbjct: 153 tactccctccgtcccagaatatagcaacctagga 120
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacct 46
||||| ||||||||||| ||||||||||||
Sbjct: 151 tactccctccgtcccaaaatatagcaacct 122
>RF00906;MIR1122;AL935069.5/103851-103727 4530:Oryza sativa (rice)
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 144 atattgggacggagggagtagt 165
||||||||||||||||||||||
Sbjct: 24 atattgggacggagggagtagt 3
>RF00906;MIR1122;AL606656.3/84170-84034 39947:Oryza sativa Japonica
Group
Length = 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 144 atattgggacggagggagtagt 165
||||||||||||||||||||||
Sbjct: 114 atattgggacggagggagtagt 135
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacct 46
||||| ||||||||||| ||||||||||||
Sbjct: 152 tactccctccgtcccaaaatatagcaacct 123
>RF00906;MIR1122;AACV01013835.1/10952-10825 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctccgtcccaatatatagcaacctag 48
||||||||||| ||||||||||||||
Sbjct: 11 ctccgtcccaaaatatagcaacctag 36
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
Indica Group
Length = 99
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 17 tactctctccgtcccaatatatagcaacct 46
||||| ||||||||||| ||||||||||||
Sbjct: 95 tactccctccgtcccaaaatatagcaacct 66
