miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00661;mir-31;AAPU01010140.1/40129-40215 7230:Drosophila
mojavensis
Length = 87
Score = 172 bits (87), Expect = 5e-43
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 tctattgttgaattggcaagatgtcggcatagctgacgtttcaaagcgcattgcatagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctattgttgaattggcaagatgtcggcatagctgacgtttcaaagcgcattgcatagcg 60
Query: 61 ctatgctgcatctagtcagttattcaa 87
|||||||||||||||||||||||||||
Sbjct: 61 ctatgctgcatctagtcagttattcaa 87
>RF00661;mir-31;AANI01014909.1/166793-166706 7244:Drosophila
virilis
Length = 88
Score = 119 bits (60), Expect = 6e-27
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 5 ttgttgaattggcaagatgtcggcatagctgacgtttcaaagcgca-ttgcatagcgcta 63
||||| ||||||||||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 5 ttgttcaattggcaagatgtcggcatagctgacgtttgaaagcgcatttttatagcgcta 64
Query: 64 tgctgcatctagtcagttattcaa 87
||||||||||||||||||||||||
Sbjct: 65 tgctgcatctagtcagttattcaa 88
>RF00661;mir-31;AAPQ01007042.1/187291-187204 7220:Drosophila
erecta
Length = 88
Score = 83.8 bits (42), Expect = 4e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 11 aattggcaagatgtcggcatagctgacgtttcaaagcgc-attgcatagcgctatgctgc 69
|||||||||||||||||||||||||||||| ||||||| || | |||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctgacgttgaaaagcgcttttaaagagcgctatgctgc 70
Query: 70 atctagtcagttattcaa 87
|||||||||||| |||||
Sbjct: 71 atctagtcagttgttcaa 88
>RF00661;mir-31;AAGH01011800.1/12196-12109 7240:Drosophila
simulans
Length = 88
Score = 83.8 bits (42), Expect = 4e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 11 aattggcaagatgtcggcatagctgacgtttcaaagcg-cattgcatagcgctatgctgc 69
|||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctgacgttgaaaagcgattttgaagagcgctatgctgc 70
Query: 70 atctagtcagttattcaa 87
|||||||||||| |||||
Sbjct: 71 atctagtcagttgttcaa 88
>RF00661;mir-31;AAIZ01001980.1/15086-15173 7234:Drosophila
persimilis
Length = 88
Score = 71.9 bits (36), Expect = 1e-12
Identities = 70/79 (88%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 11 aattggcaagatgtcggcatagctgacgtttcaaagcg--cattgcatagcgctatgctg 68
|||||||||||||||||||||||||| ||| |||||| | ||| | | ||||||||||
Sbjct: 11 aattggcaagatgtcggcatagctgaagttgaaaagcgatctttg-agaacgctatgctg 69
Query: 69 catctagtcagttattcaa 87
|||||||||||||||||||
Sbjct: 70 catctagtcagttattcaa 88
>RF00661;mir-31;AAQB01006276.1/72264-72183 7260:Drosophila
willistoni
Length = 82
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 gaattggcaagatgtcggcatagctga 36
|||||||||||||||||||||||||||
Sbjct: 10 gaattggcaagatgtcggcatagctga 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 agcgctatgctgcatctagtcagtt 81
|||||||||||||||||||||||||
Sbjct: 52 agcgctatgctgcatctagtcagtt 76
>RF00661;mir-31;AAZO01004538.1/561-481 121224:Pediculus humanus
corporis (human body louse)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAZX01004302.1/23296-23375 7425:Nasonia
vitripennis (jewel wasp)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AADG05006757.1/17977-18057 7460:Apis mellifera
(honey bee)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
>RF00661;mir-31;AAJJ01000269.1/62248-62171 7070:Tribolium
castaneum (red flour beetle)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ggcaagatgtcggcatagctga 36
||||||||||||||||||||||
Sbjct: 15 ggcaagatgtcggcatagctga 36
